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Structural Insight into Activation Mechanism of Toxoplasma gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction

机译:二硫化物还原对弓形虫核苷三磷酸二磷酸水解酶激活机理的结构研究

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摘要

The intracellular parasite Toxoplasma gondii produces two nucleoside triphosphate diphosphohydrolases (NTPDase1 and -3). These tetrameric, cysteine-rich enzymes require activation by reductive cleavage of a hitherto unknown disulfide bond. Despite a 97% sequence identity, both isozymes differ largely in their ability to hydrolyze ATP and ADP. Here, we present crystal structures of inactive NTPDase3 as an apo form and in complex with the product AMP to resolutions of 2.0 and 2.2 Å, respectively. We find that the enzyme is present in an open conformation that precludes productive substrate binding and catalysis. The cysteine bridge 258–268 is identified to be responsible for locking of activity. Crystal structures of constitutively active variants of NTPDase1 and -3 generated by mutation of Cys258–Cys268 show that opening of the regulatory cysteine bridge induces a pronounced contraction of the whole tetramer. This is accompanied by a 12° domain closure motion resulting in the correct arrangement of all active site residues. A complex structure of activated NTPDase3 with a non-hydrolyzable ATP analog and the cofactor Mg2+ to a resolution of 2.85 Å indicates that catalytic differences between the NTPDases are primarily dictated by differences in positioning of the adenine base caused by substitution of Arg492 and Glu493 in NTPDase1 by glycines in NTPDase3.
机译:细胞内寄生虫弓形虫产生两个核苷三磷酸二磷酸水解酶(NTPDase1和-3)。这些四聚体,富含半胱氨酸的酶需要通过还原性切割迄今未知的二硫键来激活。尽管具有97%的序列同一性,但两种同工酶的水解ATP和ADP的能力差异很大。在这里,我们介绍了无活性NTPDase3的晶体结构,为apo形式,与AMP产物复合,分别具有2.0和2.2 resolution的分辨率。我们发现该酶以开放构象存在,从而阻止了生产性底物的结合和催化作用。半胱氨酸桥258–268被认为是导致活动锁定的原因。 Cys 258 –Cys 268 突变产生的NTPDase1和-3组成型活性变体的晶体结构表明,调节性半胱氨酸桥的打开诱导整个四聚体的明显收缩。这伴随着12°域闭合运动,导致所有活性位点残基的正确排列。活化的NTPDase3与不可水解的ATP类似物和辅助因子Mg 2 + 的复杂结构,分辨率为2.85Å,表明NTPDase之间的催化差异主要由腺嘌呤碱基的位置差异决定NTPDase3中的甘氨酸取代NTPDase1中的Arg 492 和Glu 493 引起的。

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