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171 Fecal microbiota transplant at weaning improves growth performance and alters fecal microbiome in pigs

机译:断奶的粪便微生物群移植提高了生长性能并在猪中改变了粪便微生物组

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摘要

To evaluate the effect of fecal microbiota transplant (FMT) on the growth performance and fecal microbiome, a total of 24 weaned pigs were stratified by weaning BW and sex, and assigned to one of two groups: a) Control (20% glycerol); b) FMT (from a healthy-grower-stage-no-antibiotics-treated pig). Microbiota mixture or placebo were drenched to pigs for two consecutive days after weaning (d-0 and -1). All pigs were fed antibiotics-free diets for an 8 feeding phase regimes: nursery phase 1, 2, and 3 (0–8, 8–21 and 21–40 d, respectively); finisher phase 1, 2, 3, 4, and 5 (40–63, 63–78, 78–117, 117–138, and 138–166 d, respectively). Individual pig BW was recorded at each phase change, and FOMeater data were collected at the end of trial. Growth and carcass data were analyzed by GLM procedure of SAS (Cary, NC) as CBD. Rectal swabs were collected prior to treatment, on d 1 & 2, and at each phase change. DNA was extracted from these swabs, amplified by primers targeting the V4 region of the 16S rDNA gene, and sequenced using an Illumina MiSeq sequencer. Sequences were classified against Ribosomal Database Project using Mothur (v.1.42) package. Pigs received FMT tended to have greater weight gain during finisher phase 1 (1.05 vs 0.91 kg/d, P = 0.07), and heavier HCW (105.5 vs 97.6 kg, P = 0.09) than control. PCoA plot based on the Jaccard distance shows that FMT pigs microbiota community was not different from control pigs until the end of nursery phase 2 (ANOSIM, R = 0.237, P < 0.01) and 3 (R = 0.241, P = 0.01). Classification-based Random Forest revealed that OTU3 Streptococcus (d 3, 63, 117) and OTU95 Selenomonas (d 8, 21) were more abundant in the FMT pigs than in control pigs. Results suggests that FMT at weaning age from grower stage pig donor modulate microbiome and improve growth performance.
机译:为了评估粪便微生物群移植(FMT)对生长性能和粪便微生物组的影响,通过断奶BW和性别分具有24只断奶猪,并分配到两组中的一种:a)对照(20%甘油); b)FMT(来自健康的种植阶段无抗生素治疗的猪)。断奶后连续两天浸没微生物酵母混合物或安慰剂(D-0和-1)。所有猪均针对8个饲料阶段制度提供无抗生素的饮食:苗圃阶段1,2和3(0-8,8-21和21-40d);整理剂阶段1,2,3,4和5(40-63,63-78,78-117,117-138和138-166d)。在每个相变记录单个猪BW,在试验结束时收集FOMER数据。通过CBD的SAS(Cary,NC)的GLM程序分析生长和胴体数据。在治疗之前,在D 1和2和每个相变化之前收集直肠拭子。从这些拭子中提取DNA,通过靶向16S rDNA基因的V4区的引物扩增,并使用Illumina miseq测序仪测序。使用Mothur(V.1.42)封装对核糖体数据库项目进行分类。在整理剂阶段1(1.05 vs 0.91kg / d,p = 0.07)和较重的HCW(105.5 Vs 97.6 kg,p = 0.09)中,猪倾向于具有更大的体重增加(1.05 vs 0.91kg / d,p = 0.07),而不是对照。基于Jaccard距离的PCOA图表明,FMT猪微生物群落与对照猪不同,直至苗圃相2(Anosim,r = 0.237,P <0.01)和3(r = 0.241,P = 0.01)。基于分类的随机森林显示,OTU3链球菌(D 3,63,117)和OTU95 Selenomonas(D 8,21)在FMT猪中比对照猪更丰富。结果表明,从种植阶段猪供体调节微生物组的断奶年龄的FMT,提高生长性能。

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