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Kinome screen of ferroptosis reveals a novel role of ATM in regulating iron metabolism

机译:裂解子的Kinome筛网揭示了ATM在调节铁代谢方面的新颖作用

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摘要

Kinome screening identified 34 kinase essential for cystine-deprived death. a Scatter plot displayed the effects of siRNA-mediated silencing of individual kinase on the viability of MDA-MB-231 under cystine-deprived (Y-axis) and full media (X-axis) upon the siRNA-mediated silencing of individual kinase in MADA-MB-231 breast cancer cells. Y-axis and X-axis are the relative cell viabilities after knockdown each kinase normalized against nontargeting control siRNA in cystine deprived and normal medium, respectively. Each purple dot represents individual kinase-targeting pooled siRNA; each red dot represents significant “hits” from the screen based on the log-transformed normalized viability and calculated by ANOVA (threshold: p < 0.0001). b List of 34 “hit” essential kinases is shown with their normalized viability (against nontarget siRNA) in the control full media or cystine-deprived media (ANOVA p < 0.0001). The kinases were ranked by the normalized viability under cystine deprivation. c STRING analysis of all the hit kinases based on the protein–protein interaction networks, highlighting the essential role of ATM and ATR as highly connecting nodes among the kinases essential for the cystine-deprived death
机译:Kinome筛选鉴定了34个激酶对胱氨酸剥夺的死亡是必不可少的。散点图显示的单独激酶的siRNA介导的沉默对MDA-MB-231下胱氨酸剥夺(Y轴)和完全培养基(X轴)的生存力在个人激酶在siRNA介导的沉默作用Mada-MB-231乳腺癌细胞。 y轴和X轴分别是敲低抗靶向对照siRNA中的每个激酶分别在胱氨酸剥夺和正常介质中的相对细胞活性。每个紫点代表池靶向粘合的siRNA;每个红色点基于屏幕基于对数转换的归一化活力,通过ANOVA计算(阈值:P <0.0001),表示显着的“命中”。 B 34“命中”必需激酶列表显示,在对照全介质或胱氨酸剥夺培养基中,具有它们的归一化活力(对抗Nontarget siRNA)(ANOVA P <0.0001)。通过在胱氨酸剥夺下通过标准化的活力进行排序。 C基于蛋白质 - 蛋白质相互作用网络的所有HIT激酶的C字符串分析,突出了ATM和ATR的基本作用,以及胱氨酸剥夺死亡所必需的激酶中的高度连接节点

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