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Machine Learning Algorithms Applied to Identify Microbial Species by Their Motility

机译:机器学习算法应用于识别微生物物种的运动

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摘要

(1) Background: Future missions to potentially habitable places in the Solar System require biochemistry-independent methods for detecting potential alien life forms. The technology was not advanced enough for onboard machine analysis of microscopic observations to be performed in past missions, but recent increases in computational power make the use of automated in-situ analyses feasible. (2) Methods: Here, we present a semi-automated experimental setup, capable of distinguishing the movement of abiotic particles due to Brownian motion from the motility behavior of the bacteria Pseudoalteromonas haloplanktis, Planococcus halocryophilus, Bacillus subtilis, and Escherichia coli. Supervised machine learning algorithms were also used to specifically identify these species based on their characteristic motility behavior. (3) Results: While we were able to distinguish microbial motility from the abiotic movements due to Brownian motion with an accuracy exceeding 99%, the accuracy of the automated identification rates for the selected species does not exceed 82%. (4) Conclusions: Motility is an excellent biosignature, which can be used as a tool for upcoming life-detection missions. This study serves as the basis for the further development of a microscopic life recognition system for upcoming missions to Mars or the ocean worlds of the outer Solar System.
机译:(1)背景:未来的未来特派团到太阳系中的潜在可居住的地方需要生物化学 - 用于检测潜在的外国生活形式的方法。该技术未到足够先进的用于在过去的任务中进行微观观测的船上机器分析,但近期计算能力的增加使得使用自动原位分析可行的分析。 (2)方法:在此,我们提出了一种半自动实验设置,能够区分非生物颗粒的运动,因为从细菌假细菌假芽孢子霍普拉斯氏菌,Planococcus halocryophilus,Bacillus枯草芽孢杆菌和大肠杆菌和大肠杆菌的动力行为。监督机器学习算法还用于基于其特征运动行为具体识别这些物种。 (3)结果:虽然我们能够将来自非生物运动的微生物运动区分,因为褐色运动,精度超过99%,所选物种的自动识别率的准确性不超过82%。 (4)结论:动机是一种优秀的生物关键,可用作即将到来的寿命检测任务的工具。本研究担任进一步发展用于即将到来的马斯任务或外部太阳系的海洋世界的微观寿命识别系统的基础。

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