首页> 美国卫生研究院文献>Biology >Expanding the Limits of Computer-Assisted Sperm Analysis through the Development of Open Software
【2h】

Expanding the Limits of Computer-Assisted Sperm Analysis through the Development of Open Software

机译:通过开放软件的开发来扩展计算机辅助精液分析的限制

代理获取
本网站仅为用户提供外文OA文献查询和代理获取服务,本网站没有原文。下单后我们将采用程序或人工为您竭诚获取高质量的原文,但由于OA文献来源多样且变更频繁,仍可能出现获取不到、文献不完整或与标题不符等情况,如果获取不到我们将提供退款服务。请知悉。

摘要

Computer assisted sperm analysis (CASA) systems can reduce errors occurring in manual analysis. However, commercial CASA systems are frequently not applicable at the forefront of challenging research endeavors. The development of open source software may offer important solutions for researchers working in related areas. Here, we present an example of this, with the development of three new modules for the OpenCASA software (hosted at Github). The first is the , a powerful tool for studying sperm chemotactic behavior, analyzing the sperm accumulation in the direct vicinity of the stimuli. This module was validated by comparing fish sperm accumulation, with or without the influence of an attractant. The analysis clearly indicated cell accumulation in the treatment group, while the distribution of sperm was random in the control group. The second is the Sperm Functionality Module, based on the ability to recognize five sperm subpopulations according to their fluorescence patterns associated with the plasma membrane and acrosomal status. The last module is the Sperm Concentration Module, which expands the utilities of OpenCASA. These last two modules were validated, using bull sperm, by comparing them with visual counting by an observer. A high level of correlation was achieved in almost all the data, and a good agreement between both methods was obtained. With these newly developed modules, OpenCASA is consolidated as a powerful free and open-source tool that allows
机译:计算机辅助精子分析(CASA)系统可以减少手动分析中发生的错误。然而,商业CASA系统通常不适用于挑战性的研究努力的最前沿。开源软件的开发可以为相关领域工作的研究人员提供重要解决方案。在这里,我们展示了一个例子,开发了一个用于OpenCasa软件的新模块(在GitHub托管)。首先是一种用于研究精子趋化行为的强大工具,分析了刺激的直接附近的精子积累。通过比较鱼精子积聚,有或没有引诱剂的影响,验证了该模块。该分析清楚地表明治疗组中的细胞积累,而精子的分布在对照组中是随机的。第二是精子功能模块,基于识别与与质膜相关的荧光模式的五种精子亚群的能力。最后一个模块是精子浓度模块,扩大了Opencasa的实用程序。使用比较通过观察者的视觉计数来验证这些最后两个模块。在几乎所有数据中实现了高水平的相关性,并且获得了两种方法之间的良好一致性。通过这些新开发的模块,OpenCasa被整合为允许的功能强大和开源工具

相似文献

  • 外文文献
  • 中文文献
  • 专利
代理获取

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号