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An outcome model for human bladder cancer: A comprehensive study based on weighted gene co‐expression network analysis

机译:人膀​​胱癌的结果模型:基于加权基因共表达网络分析的综合研究

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摘要

The precision evaluation of prognosis is crucial for clinical treatment decision of bladder cancer (BCa). Therefore, establishing an effective prognostic model for BCa has significant clinical implications. We performed WGCNA and DEG screening to initially identify the candidate genes. The candidate genes were applied to construct a LASSO Cox regression analysis model. The effectiveness and accuracy of the prognostic model were tested by internal/external validation and pan‐cancer validation and time‐dependent ROC. Additionally, a nomogram based on the parameter selected from univariate and multivariate cox regression analysis was constructed. Eight genes were eventually screened out as progression‐related differentially expressed candidates in BCa. LASSO Cox regression analysis identified 3 genes to build up the outcome model in E‐MTAB‐4321 and the outcome model had good performance in predicting patient progress free survival of BCa patients in discovery and test set. Subsequently, another three datasets also have a good predictive value for BCa patients' OS and DFS. Time‐dependent ROC indicated an ideal predictive accuracy of the outcome model. Meanwhile, the nomogram showed a good performance and clinical utility. In addition, the prognostic model also exhibits good performance in pan‐cancer patients. Our outcome model was the first prognosis model for human bladder cancer progression prediction via integrative bioinformatics analysis, which may aid in clinical decision‐making.
机译:预后的精确评估对于膀胱癌(BCa)的临床治疗决策至关重要。因此,建立有效的BCa预后模型具有重要的临床意义。我们进行了WGCNA和DEG筛选以初步鉴定候选基因。应用候选基因构建LASSO Cox回归分析模型。通过内部/外部验证,全癌验证和时间依赖性ROC检验了预后模型的有效性和准确性。此外,基于从单变量和多变量cox回归分析中选择的参数构建了列线图。最终筛选出8个基因作为BCa中与进展相关的差异表达候选基因。 LASSO Cox回归分析确定了3个基因来建立E‐MTAB‐4321中的结果模型,并且该结果模型在预测发现和测试集中的BCa患者的无进展生存期方面具有良好的预测性能。随后,另外三个数据集对BCa患者的OS和DFS也具有良好的预测价值。时间依赖性ROC表示结果模型的理想预测准确性。同时,诺模图显示了良好的性能和临床实用性。此外,该预后模型在全癌患者中也表现出良好的表现。我们的结果模型是通过综合生物信息学分析预测人类膀胱癌进展的第一个预后模型,这可能有助于临床决策。

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