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Computational studies of a series of 2-substituted phenyl-2-oxo- 2-hydroxyl- and 2-acylloxyethylsulfonamides as potent anti-fungal agents

机译:作为有效的抗真菌剂的一系列2-取代的苯基-2-氧代2-羟基和2-酰氧基乙基磺酰胺的计算研究

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摘要

Botrytis Cinerea is a plant pathogen that affect a large number of plant species like tomatoes, Lettuce, Grapes, and Strawberries among others. Sulfonamides are widely used in pharmaceutical industries as anti-cancer, anti-inflammatory and anti-viral agents. To complement our previous QSAR study, a ligand-based design and ADME/T study were carried out on these sulfonamides compounds for their fungicidal activity toward “Botrytis Cinerea”. With the help of AutoDock Vina version 4.0 in Pyrex software, the docking analysis was performed after optimization of the compounds at DFT/B3LYP/6-31G∗ quantum mechanical method using Spartan 14 softwar. Using the model generated in the previous QSAR work, the descriptors of the chosen model were considered in modifying the most promising compound ‘9’ in which twelve (12) derivatives were designed and found to have better activity than the template (compound 9). With compound 9j having the highest activity that turns out to be about 14 and 15 times more potent than the commercial fungicides “procymidone and chlorothalonil”. Furthermore, ADME/T properties of the designed compounds were calculated using the SwissADME online tool in which all the compounds were found to have good pharmacokinetic profile. Moreover, a molecular docking study on selected compounds of the dataset (compound 8, 13, 14, 19, 20, 21, 22 and 29) revealed that compound ‘20’ turned out to have the highest docking score of -8.5 kJ/mol. This compound has a strong affinity with the macromolecular target point (PDB ID: ) producing H-bond and hydrophobic interaction at the target point of amino acid residue. The molecular docking analysis gave an insight on the structure-based design of the new compounds with better activity against B. cinerea.
机译:Botrytis Cinerea是一种植物病原体,会影响诸如番茄,生菜,葡萄和草莓等众多植物。磺酰胺类药物在制药工业中广泛用作抗癌,抗炎和抗病毒剂。为了补充我们先前的QSAR研究,对这些磺酰胺类化合物进行了基于配体的设计和ADME / T研究,这些化合物对“葡萄孢菌”具有杀真菌活性。借助Pyrex软件中的AutoDock Vina版本4.0,使用Spartan 14软件在DFT / B3LYP / 6-31G *量子力学方法中对化合物进行了优化后,进行了对接分析。使用先前QSAR工作中生成的模型,在修改最有前途的化合物“ 9”时考虑了所选模型的描述符,在该化合物中设计了十二(12)个衍生物,并发现其活性比模板(化合物9)更好。具有最高活性的化合物9j的效力比市售杀真菌剂“扑灭酮和百菌清”高约14至15倍。此外,使用SwissADME在线工具计算了设计化合物的ADME / T性质,发现所有化合物均具有良好的药代动力学特征。此外,对数据集中所选化合物(化合物8、13、14、19、20、21、22和29)的分子对接研究表明,化合物'20'的对接得分最高,为-8.5 kJ / mol 。该化合物与大分子目标点(PDB ID :)具有很强的亲和力,在氨基酸残基的目标点产生H键和疏水相互作用。分子对接分析提供了对具有更好抗灰葡萄孢菌活性的新化合物的基于结构的设计的见解。

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