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Secretome analysis of patient-derived GBM tumor spheres identifies midkine as a potent therapeutic target

机译:对源自患者的GBM肿瘤球体的Secretome分析表明中期因子是有效的治疗靶标

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摘要

A schematic diagram describing the experimental procedures. A Circos plot showing the subcellular localization, source and functional classification based on Gene Ontology (GO) analysis using the DAVID web tool (top). ClueGO analysis for functionally grouped networks of enriched categories for representative biological processes. The node size indicates the significance of the term value corrected via the Bonferroni step down approach (bottom). A schematic demonstrating the stratification of identified proteins. The association with cancer and the prognostic influence were determined using the DAVID web tool (GAD disease class, cancer) and the Human Protein Atlas web tool, respectively. Kaplan−Meier analysis of survival in a dataset of IDH-1 wild-type (WT) GBM patients from The Cancer Genome Atlas (TCGA) according to their MDK level. MDK mRNA expression level across normal brain and glioma specimens with different histological grades in a Rembrandt dataset. Immunohistochemical analyses of MDK expression in GBM specimens. The bar represents 100 µm.
机译:描述实验程序的示意图。一张Circos图,显示使用DAVID网络工具基于基因本体(GO)分析的亚细胞定位,来源和功能分类。用于代表生物过程的丰富类别的功能分组网络的ClueGO分析。节点大小表示通过Bonferroni降压方法(底部)校正的项值的重要性。示意图显示了已鉴定蛋白质的分层。分别使用DAVID网络工具(GAD疾病类别,癌症)和Human Protein Atlas网络工具确定与癌症的关系和预后影响。根据癌症基因组图谱(TCGA)的IDH-1野生型(WT)GBM患者数据集中的Kaplan-Meier分析,根据其MDK水平。伦勃朗数据集中具有不同组织学等级的正常脑和神经胶质瘤标本中的MDK mRNA表达水平。 GBM标本中MDK表达的免疫组织化学分析。条形代表100μm。

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