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An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response

机译:蔗糖非发酵相关激酶1在非生物胁迫响应中的脱落酸响应蛋白相互作用网络

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摘要

Overview of the Y2H screen. Six SnRK1 subunits were fused to the GAL4 activation domain (AD) and mated with 254 ABA library clones fused to the LexA DNA binding domain (BD). Positive interactors were scored on solid media lacking leucine or supplemented with X-gal. Two replicate plates per reporter were conducted for each of the six SnRK1 subunits. Representation of the ABA-responsive SnRK1 interaction network. Forty-eight core SnRK1-interacting-proteins (SnIPs) partnered with SnRK1α and β/βγ subunits (nodes in the large central circle). Proteins (nodes) are colored based on GO molecular function. Y2H assay sensitivity and background determined with a positive (PRS) and random (RRS) reference set, respectively. One hundred and thirty two high confidence interactions (HCI) were retested by Y2H and eight by BiFC. GO Slim molecular function distribution of the 125 SnRK1 complex interacting proteins (SnIPs).
机译:Y2H屏幕概述。将六个SnRK1亚基与GAL4激活域(AD)融合,并与254个与LexA DNA结合域(BD)融合的ABA库克隆配对。在缺乏亮氨酸或补充X-gal的固体培养基上对阳性相互作用物进行评分。对于六个SnRK1亚基中的每一个,每个报告子进行两个重复平板。 ABA响应式SnRK1交互网络的表示。 48个核心SnRK1相互作用蛋白(SnIP)与SnRK1α和β/βγ亚基(大中心圆中的节点)结合。蛋白质(节点)根据GO分子功能着色。 Y2H检测灵敏度和背景分别通过阳性(PRS)和随机(RRS)参考集确定。 Y2H重新测试了132个高可信度交互(HCI),BiFC重新测试了八个。 125 SnRK1复杂相互作用蛋白(SnIP)的GO Slim分子功能分布。

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