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Genetic Algorithms for Finite Mixture Model Based Voxel Classification in Neuroimaging

机译:基于有限混合模型的神经成像体素分类的遗传算法

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摘要

Finite mixture models (FMMs) are an indispensable tool for unsupervised classification in brain imaging. Fitting an FMM to the data leads to a complex optimization problem. This optimization problem is difficult to solve by standard local optimization methods, such as the expectation-maximization (EM) algorithm, if a principled initialization is not available. In this paper, we propose a new global optimization algorithm for the FMM parameter estimation problem, which is based on real coded genetic algorithms. Our specific contributions are two-fold: 1) we propose to use blended crossover in order to reduce the premature convergence problem to its minimum and 2) we introduce a completely new permutation operator specifically meant for the FMM parameter estimation. In addition to improving the optimization results, the permutation operator allows for imposing biologically meaningful constraints to the FMM parameter values. We also introduce a hybrid of the genetic algorithm and the EM algorithm for efficient solution of multidimensional FMM fitting problems. We compare our algorithm to the self-annealing EM-algorithm and a standard real coded genetic algorithm with the voxel classification tasks within the brain imaging. The algorithms are tested on synthetic data as well as real three-dimensional image data from human magnetic resonance imaging, positron emission tomography, and mouse brain MRI. The tissue classification results by our method are shown to be consistently more reliable and accurate than with the competing parameter estimation methods.
机译:有限混合模型(FMM)是大脑成像中无监督分类的必不可少的工具。将FMM拟合到数据会导致复杂的优化问题。如果没有原则上的初始化,则很难通过标准的局部优化方法(例如期望最大化(EM)算法)解决此优化问题。在本文中,我们提出了一种基于实数编码遗传算法的FMM参数估计问题的全局优化新算法。我们的具体贡献有两个方面:1)我们建议使用混合交叉以将过早收敛的问题减少到最小; 2)我们引入了一种全新的置换算子,专门用于FMM参数估计。除了改善优化结果之外,置换算子还允许对FMM参数值施加生物学上有意义的约束。我们还介绍了遗传算法和EM算法的混合方法,可有效解决多维FMM拟合问题。我们将我们的算法与自我退火EM算法和标准的真实编码遗传算法进行比较,并在大脑成像中具有体素分类任务。该算法在合成数据以及来自人类磁共振成像,正电子发射断层扫描和鼠标大脑MRI的真实三维图像数据上进行了测试。与其他竞争性参数估计方法相比,我们的方法得出的组织分类结果显示出始终如一的可靠性和准确性。

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