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Calculating pKa values for substituted phenols and hydration energies for other compounds with the first-order Fuzzy-Border continuum solvation model

机译:计算与一阶模糊边界连续素溶剂化模型的其他化合物的取代酚和水合能的PKA值

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摘要

We have computed pKa values for eleven substituted phenol compounds using the continuum Fuzzy-Border (FB) solvation model. Hydration energies for 40 other compounds, including alkanes, alkenes, alkynes, ketones, amines, alcohols, ethers, aromatics, amides, heterocycles, thiols, sulfides and acids have been calculated. The overall average unsigned error in the calculated acidity constant values was equal to 0.41 pH units and the average error in the solvation energies was 0.076 kcal/mol. We have also reproduced pKa values of propanoic and butanoic acids within ca. 0.1 pH units from the experimental values by fitting the solvation parameters for carboxylate ion carbon and oxygen atoms. The FB model combines two distinguishing features. First, it limits the amount of noise which is common in numerical treatment of continuum solvation models by using fixed-position grid points. Second, it employs either second- or first-order approximation for the solvent polarization, depending on a particular implementation. These approximations are similar to those used for solute and explicit solvent fast polarization treatment which we developed previously. This article describes results of employing the first-order technique. This approximation places the presented methodology between the Generalized Born and Poisson-Boltzmann continuum solvation models with respect to their accuracy of reproducing the many-body effects in modeling a continuum solvent.
机译:我们使用连续模糊边界(FB)溶剂化模型计算了11种取代酚化合物的pKa值。已计算出其他40种化合物的水合能,包括烷烃,烯烃,炔烃,酮,胺,醇,醚,芳族化合物,酰胺,杂环,硫醇,硫化物和酸。计算出的酸度常数的总的平均无符号误差等于0.41 pH单位,溶剂化能的平均误差为0.076 kcal / mol。我们还重现了大约20分钟内的丙酸和丁酸的pKa值。通过拟合羧酸根离子碳和氧原子的溶剂化参数,从实验值获得0.1 pH单位。 FB模型结合了两个独特的功能。首先,它通过使用固定位置的网格点来限制在连续溶剂化模型的数值处理中常见的噪声量。其次,根据特定的实现方式,它对溶剂极化采用二阶或一阶近似。这些近似值类似于我们先前开发的用于溶质和显式溶剂快速极化处理的近似值。本文介绍了采用一阶技术的结果。关于它们在再现连续体溶剂模型中重现多体效应的准确性方面,这种近似将本文提出的方法置于广义Born和Poisson-Boltzmann连续体溶剂化模型之间。

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