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A HIERARCHICAL FUNCTIONAL DATA ANALYTIC APPROACH FOR ANALYZING PHYSIOLOGICALLY BASED PHARMACOKINETIC MODELS

机译:分析生理基于药代动力学模型的分层功能数据分析方法

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摘要

Ordinary differential equation (ODE) based models find application in a wide variety of biological and physiological phenomena. For instance, they arise in the description of gene regulatory networks, study of viral dynamics and other infectious diseases, etc. In the field of toxicology, they are used in physiologically based pharmacokinetic (PBPK) models for describing absorption, distribution, metabolism and excretion (ADME) of a chemical in-vivo. Knowledge about the model parameters is important for understanding the mechanism of action of a chemical and are often estimated using non-linear least squares methodology. However, there are several challenges associated with the usual methodology. Using functional data analytic methodology, in this article we develop a general framework for drawing inferences on parameters in models described by a system of differential equations. The proposed methodology takes into account variability between and within experimental units. The performance of the proposed methodology is evaluated using a simulation study and data obtained from a benzene inhalation study. We also describe a R-based software developed towards this purpose.
机译:基于常微分方程(ODE)的模型可用于多种生物学和生理现象。例如,它们出现在基因调控网络的描述中,病毒动力学和其他传染病的研究等。在毒理学领域,它们被用于基于生理学的药代动力学(PBPK)模型中,以描述吸收,分布,代谢和排泄。 (ADME)的化学体内。有关模型参数的知识对于理解化学物质的作用机理非常重要,并且通常使用非线性最小二乘法进行估算。然而,与通常的方法相关的一些挑战。本文使用功能数据分析方法,开发了一个通用框架,用于对由微分方程组描述的模型中的参数进行推断。所提出的方法考虑了实验单元之间和内部的可变性。拟议方法的性能通过模拟研究和从苯吸入研究获得的数据进行评估。我们还描述了为此目的开发的基于R的软件。

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