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Population Genetic History of Aristeus antennatus (Crustacea: Decapoda) in the Western and Central Mediterranean Sea

机译:地中海中西部海域触角线虫(甲壳纲:十足目)的种群遗传历史

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摘要

Aristeus antennatus is an ecologically and economically important deep-water species in the Mediterranean Sea. In this study we investigated the genetic variability of A. antennatus sampled from 10 sampling stations in the Western and Central Mediterranean. By comparing our new samples with available data from the Western area, we aim to identify potential genetic stocks of A. antennatus and to reconstruct its historical demography in the Mediterranean. We analyzed two regions of mitochondrial DNA in 319 individuals, namely COI and 16S. We found two main results: i) the genetic diversity values consistent with previous data within the Mediterranean and the absence of barriers to gene flow within the Mediterranean Sea; ii) a constant long-term effective population size in almost all demes but a strong signature of population expansion in the pooled sample about 50,000 years B.P./ago. We propose two explanation for our results. The first is based on the ecology of A. antennatus. We suggest the existence of a complex meta-population structured into two layers: a deeper-dwelling stock, not affected by fishing, which preserves the pattern of historical demography; and genetically homogeneous demes inhabiting the fishing grounds. The larval dispersal, adult migration and continuous movements of individuals from “virgin” deeper grounds not affected by fishing to upper fishing areas support an effective ‘rescue effect’ contributing to the recovery of the exploited stocks and explain their genetic homogeneity throughout the Mediterranean Sea. The second is based on the reproduction model of this shrimp: the high variance in offspring production calls for a careful interpretation of the data observed under classical population genetics and Kingman’s coalescent. In both cases, management policies for A. antennatus will therefore require careful evaluation of the meta-population dynamics of all stocks in the Mediterranean. In the future, it will be particularly relevant to sample the deepest ones directly.
机译:触角线虫是地中海中一种在生态和经济上很重要的深水物种。在这项研究中,我们调查了从地中海中西部的10个采样站采样的触角蚁的遗传变异性。通过将我们的新样本与西部地区的可用数据进行比较,我们旨在确定触角拟南芥的潜在遗传资源,并重建其在地中海的历史人口统计学。我们分析了319个个体的线粒体DNA的两个区域,即COI和16S。我们发现了两个主要结果:i)遗传多样性值与地中海地区以前的数据一致,并且在地中海地区不存在阻碍基因流动的障碍; ii)几乎所有人口活动中长期有效的长期人口规模不变,但在公元前50,000年左右的合并样本中,人口扩张的迹象很明显。我们对结果提出两个解释。第一种是基于触角拟杆菌的生态学。我们建议存在一个由两层结构构成的复杂的元人口群体:一个不受捕鱼影响的更深的种群,它保留了历史人口统计学的模式;和遗传上同质化的栖居在渔场中。个体的幼虫散布,成年迁徙和连续不断地从不受捕鱼影响的“原始”较深处移动到较高的捕鱼区域,支持有效的“营救效果”,有助于恢复被开采的种群并解释其在整个地中海的遗传同质性。第二种是基于这种虾的繁殖模型:后代产量的高差异要求仔细解释经典种群遗传学和金曼同盟下观察到的数据。因此,在两种情况下,触角蚁的管理政策都需要仔细评估地中海所有种群的种群动态。将来,直接对最深的样本进行采样将变得尤为重要。

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