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Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase

机译:探索活性位点水在马兜铃属合成酶催化的倍半萜环化反应中的作用

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摘要

Aristolochene synthase (ATAS) is a high-fidelity terpenoid cyclase that converts farnesyl diphosphate exclusively into the bicyclic hydrocarbon aristolochene. Previously-determined crystal structures of ATAS complexes revealed trapped active site water molecules that could potentially interact with catalytic intermediates: water "w" hydrogen bonds with S303 and N299, water molecules "w1" and "w2" hydrogen bond with Q151, and a fourth water molecule is coordinated to the Mg2+c ion. There is no obvious role for water in the ATAS mechanism, since the enzyme exclusively generates a hydrocarbon product. Thus, these water molecules are tightly controlled so that they cannot react with carbocation intermediates. Steady-state kinetics and product distribution analyses of eight ATAS mutants designed to perturb interactions with active site water molecules (S303A, S303H, S303D, N299A, N299L, N299A/S303A, Q151H, and Q151E) indicate relatively modest effects on catalysis but significant effects on sesquiterpene product distributions. X-ray crystal structures of S303A, N299A, N299A/S303A, and Q151H mutants reveal minimal perturbation of active site solvent structure. Seven of the eight mutants generate farnesol and nerolidol, possibly resulting from addition of the Mg2+c-bound water molecule to the initially formed farnesyl cation, but no products are generated that would suggest enhanced reactivity of other active site water molecules. However, intermediate germacrene A tends to accumulate in these mutants. Thus, apart from the possible reactivity ofMg2+c-bound water, active site water molecules in ATAS are not directly involved in the chemistry of catalysis, but instead contribute to the template that governs the conformation of the flexible substrate and carbocation intermediates.
机译:马兜铃属合酶(ATAS)是一种高保真萜类环化酶,可将法呢基二磷酸专门转化为双环烃马兜铃属。先前确定的ATAS配合物的晶体结构表明,捕获的活性位点水分子可能与催化中间体发生相互作用:水与S303和N299的氢键“ w”和与Q151与Q151的氢键“ w2”和“ W2”水分子与Mg 2 + c离子配位水在ATAS机理中没有明显的作用,因为该酶仅产生烃产物。因此,这些水分子受到严格控制,因此它们不会与碳正离子中间体反应。八个ATAS突变体的稳态动力学和产物分布分析,旨在干扰与活性位点水分子(S303A,S303H,S303D,N299A,N299L,N299A / S303A,Q151H和Q151E)的相互作用,表明对催化作用相对适中,但影响显着在倍半萜产物的分布上。 S303A,N299A,N299A / S303A和Q151H突变体的X射线晶体结构揭示了活性位点溶剂结构的扰动最小。八个突变体中的七个产生了法尼醇和那洛利多,这可能是由于将Mg 2 + c结合的水分子添加到最初形成的法呢基阳离子中而导致的,但是没有产生表明其他化合物的反应性增强的产物活性位点水分子。但是,中间的胚芽烯A倾向于在这些突变体中积累。因此,除了可能与Mg 2 + c结合的水发生反应之外,ATAS中的活性位点水分子并不直接参与催化化学反应,而是有助于控制模板构象的模板。柔性底物和碳正离子中间体。

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