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Protein adsorption on nanoparticles: model development using computer simulation

机译:蛋白质在纳米颗粒上的吸附:使用计算机模拟的模型开发

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摘要

The adsorption of proteins on nanoparticles results in the formation of the protein corona, the composition of which determines how nanoparticles influence their biological surroundings. We seek to better understand corona formation by developing models that describe protein adsorption on nanoparticles using computer simulation results as data. Using a coarse-grained protein model, discontinuous molecular dynamics simulations are conducted to investigate the adsorption of two small proteins (Trp-cage and WW domain) on a model nanoparticle of diameter 10.0 nm at protein concentrations ranging from 0.5 to 5 mM. The resulting adsorption isotherms are well described by the Langmuir, Freundlich, Temkin and Kiselev models, but not by the Elovich, Fowler–Guggenheim and Hill–de Boer models. We also try to develop a generalized model that can describe protein adsorption equilibrium on nanoparticles of different diameters in terms of dimensionless size parameters. The simulation results for three proteins (Trp-cage, WW domain, and GB3) on four nanoparticles (diameter = 5.0, 10.0, 15.0, and 20.0 nm) illustrate both the promise and the challenge associated with developing generalized models of protein adsorption on nanoparticles.
机译:蛋白质在纳米粒子上的吸附导致蛋白质电晕的形成,其组成决定了纳米粒子如何影响其生物环境。我们通过使用计算机模拟结果作为数据来描述蛋白质在纳米颗粒上的吸附的模型,从而寻求更好地理解电晕的形成。使用粗粒蛋白质模型,进行了不连续的分子动力学模拟,以研究两种小蛋白质(Trp笼和WW域)在直径为10.0 nm的模型纳米颗粒上的吸附,蛋白质浓度范围为0.5至5 mM。 Langmuir,Freundlich,Temkin和Kiselev模型很好地描述了由此产生的吸附等温线,但Elovich,Fowler-Guggenheim和Hill-de Boer模型却没有很好地描述。我们还尝试开发一个通用模型,该模型可以根据无量纲尺寸参数描述不同直径的纳米粒子上的蛋白质吸附平衡。在四个纳米粒子(直径= 5.0、10.0、15.0和20.0 nm)上的三种蛋白质(Trp笼,WW域和GB3)的模拟结果说明了开发蛋白质在纳米粒子上吸附的通用模型所带来的希望和挑战。

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