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Ergodicity Hidden Bias and the Growth Rate Gain

机译:遍历隐性偏见和增长率

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摘要

Many single-cell observables are highly heterogeneous. A part of this heterogeneity stems from age-related phenomena: the fact that there is a nonuniform distribution of cells with different ages. This has led to a renewed interest in analytic methodologies including use of the “von Foerster equation” for predicting population growth and cell age distributions. Here we discuss how some of the most popular implementations of this machinery assume a strong condition on the ergodicity of the cell cycle duration ensemble. We show that one common definition for the term ergodicity, “a single individual observed over many generations recapitulates the behavior of the entire ensemble” is implied by the other, “the probability of observing any state is conserved across time and over all individuals” in an ensemble with a fixed number of individuals but that this is not true when the ensemble is growing. We further explore the impact of generational correlations between cell cycle durations on the population growth rate. Finally, we explore the “growth rate gain” - the phenomenon that variations in the cell cycle duration lead to an improved population-level growth rate - in this context. We highlight that, fundamentally, this effect is due to asymmetric division.
机译:许多单细胞可观察物是高度异质的。这种异质性的一部分源于与年龄有关的现象:不同年龄的细胞分布不均匀这一事实。这引起了人们对分析方法的新兴趣,包括使用“ von Foerster方程”预测种群增长和细胞年龄分布。在这里,我们讨论了该机制的一些最流行的实现方式如何对细胞周期持续时间集合的遍历性假定一个强条件。我们表明,遍历性的一个常见定义是:“观察到多个世代的单个个体概括了整个整体的行为”,另一种含义是“遍历整个时间并在所有个体中守恒任何状态的概率”。一个具有固定数量个体的合奏,但是当合奏正在增长时,情况并非如此。我们进一步探索细胞周期持续时间之间的世代相关性对人口增长率的影响。最后,在这种情况下,我们探讨了“生长速率增加”(细胞周期持续时间的变化导致种群水平增长率提高的现象)。我们着重指出,从根本上讲,这种影响是由于不对称的划分。

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