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Antibacterial activity of soil bacteria isolated from Kochi India and their molecular identification

机译:印度高知土壤细菌的抗菌活性及其分子鉴定

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摘要

The present study, deal about the antibiosis activity of soil bacteria, isolated from 10 different locations of rhizosphere and diverse cultivation at Kochi, Kerala, India. The bacteria were isolated by standard serial dilution plate techniques. Morphological characterization of the isolate was done by Gram’s staining and found that all of them gram positive. Isolated bacteria were tested against 6 human pathogens viz., Escherichia coli, Enterococcus sp., Pseudomonas aeruginosa, Klebsiella pneumoniae, Staphylococcus aureus and Acinetobacter sp. Primary screening was carried out by perpendicular streaking and seed overlay method. Based on the result of primary screening most potential isolates of S1A1 and S7A3 were selected for secondary screening. Both the isolates showed positive results against Enterococcus sp. and S.aureus. The maximum antagonistic activity of 20.98 and 27.08 mm zone of inhibition was recorded at S1A1 against Enterococcus sp. and S. aureus respectively, at 180 µl concentration. Molecular identification was carried out by 16S rRNA sequence. The 16S rRNA was amplified from the DNA samples by using PCR. The amplified 16S rRNA PCR products were purified and sequenced. The sequences were subjected to NCBI BLAST. The isolates S1A1 and S7A3 BLAST results showed 99% and 95% respectively, similarity with the available database sequence of Bacillus amyloliquefaciens. The sequences were deposited in GenBank and the accession numbers (S1A1) and (S7A3) were obtained.
机译:本研究涉及从印度喀拉拉邦高知市从根际的10个不同地点分离出来的土壤细菌的抗菌活性,并对其进行了不同的栽培。通过标准连续稀释板技术分离细菌。分离株的形态特征是通过革兰氏染色进行的,发现它们均呈阳性。对分离的细菌针对6种人类病原体进行了测试,即大肠杆菌,肠球菌,铜绿假单胞菌,肺炎克雷伯菌,金黄色葡萄球菌和不动杆菌。初步筛选通过垂直条纹和种子覆盖法进行。根据初步筛选的结果,选择了大多数潜在的S1A1和S7A3分离株进行二次筛选。两种分离物均显示出针对肠球菌的阳性结果。和金黄色葡萄球菌。在S1A1记录了对肠球菌的最大抑制活性为20.98和27.08 mm。金黄色葡萄球菌和金黄色葡萄球菌的浓度分别为180μl。通过16S rRNA序列进行分子鉴定。通过PCR从DNA样品中扩增出16S rRNA。对扩增的16S rRNA PCR产物进行纯化和测序。对序列进行NCBI BLAST。分离株S1A1和S7A3的BLAST结果分别显示99%和95%,与解淀粉芽孢杆菌的可用数据库序列相似。将该序列保藏在GenBank中,获得登录号(S1A1)和(S7A3)。

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