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Screening for major driver oncogene alterations in adenosquamous lung carcinoma using PCR coupled with next-generation and Sanger sequencing methods

机译:PCR结合下一代和Sanger测序方法筛查腺鳞癌的主要驱动癌基因改变

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摘要

We investigated the frequency of major driver oncogenes in lung adenosquamous cell carcinoma (ASC) cases. Frequency of EGFR, K-Ras, B-Raf, PIK3CA, DDR2, ALK, and PDGFRA gene mutations was examined in 56 patients using next-generation sequencing, polymerase chain reaction, and Sanger sequencing. Macrodissection or microdissection was performed in 37 cases to separate the adenomatous and squamous components of ASC. The overall mutation rate was 64.29%, including 55.36%, 7.14%, and 1.79% for EGFR, K-Ras, and B-Raf mutations, respectively. PIK3CA mutation was detected in three cases; all involved coexisting EGFR mutations. Of the 37 cases, 34 were convergent in two components, while three showed EGFR mutations in the glandular components and three showed PIK3CA mutations in the squamous components. With respect to EGFR mutations, the number of young female patients, nonsmokers, and those with positive pleural invasion was higher in the mutation-positive group than that in the mutation-negative. K-Ras mutation was significantly associated with smoking. Overall survival in the different EGFR mutation groups differed significantly. The frequency and clinicopathological characteristics of EGFR- and K-Ras-mutated adenosquamous lung carcinoma were similar to that noted in Asian adenocarcinomas patients. The high convergence mutation rate in both adenomatous and squamous components suggests monoclonality in ASC.
机译:我们调查了肺腺鳞状细胞癌(ASC)病例中主要驱动癌基因的频率。使用下一代测序,聚合酶链反应和Sanger测序对56例患者的EGFR,K-Ras,B-Raf,PIK3CA,DDR2,ALK和PDGFRA基因突变的频率进行了检查。在37例中进行了宏观解剖或显微解剖,以分离ASC的腺瘤和鳞状成分。总体突变率为64.29%,其中EGFR,K-Ras和B-Raf突变分别为55.36%,7.14%和1.79%。在三例中检测到PIK3CA突变;所有涉及共存的EGFR突变。在这37例病例中,有34例在两个成分中趋同,而三个在腺成分中显示EGFR突变,而三个在鳞状成分中显示PIK3CA突变。关于EGFR突变,突变阳性组的年轻女性患者,不吸烟者和胸膜浸润阳性的患者数量高于突变阴性组。 K-Ras突变与吸烟显着相关。不同EGFR突变组的总体生存率差异显着。 EGFR和K-Ras突变的腺鳞癌的频率和临床病理特征与亚洲腺癌患者的相似。腺瘤和鳞状组织的高收敛突变率表明ASC具有单克隆性。

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