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An Advanced Deep Learning Approach for Ki-67 Stained Hotspot Detection and Proliferation Rate Scoring for Prognostic Evaluation of Breast Cancer

机译:用于Ki-67染色热点检测和增殖率评分的先进深度学习方法用于乳腺癌的预后评估。

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摘要

Being a non-histone protein, Ki-67 is one of the essential biomarkers for the immunohistochemical assessment of proliferation rate in breast cancer screening and grading. The Ki-67 signature is always sensitive to radiotherapy and chemotherapy. Due to random morphological, color and intensity variations of cell nuclei (immunopositive and immunonegative), manual/subjective assessment of Ki-67 scoring is error-prone and time-consuming. Hence, several machine learning approaches have been reported; nevertheless, none of them had worked on deep learning based hotspots detection and proliferation scoring. In this article, we suggest an advanced deep learning model for computerized recognition of candidate hotspots and subsequent proliferation rate scoring by quantifying Ki-67 appearance in breast cancer immunohistochemical images. Unlike existing Ki-67 scoring techniques, our methodology uses Gamma mixture model (GMM) with Expectation-Maximization for seed point detection and patch selection and deep learning, comprises with decision layer, for hotspots detection and proliferation scoring. Experimental results provide 93% precision, 0.88% recall and 0.91% F-score value. The model performance has also been compared with the pathologists’ manual annotations and recently published articles. In future, the proposed deep learning framework will be highly reliable and beneficial to the junior and senior pathologists for fast and efficient Ki-67 scoring.
机译:作为一种非组蛋白,Ki-67是在乳腺癌筛查和分级中免疫组化评估增殖率的重要生物标志物之一。 Ki-67签名始终对放疗和化疗敏感。由于细胞核的形态,颜色和强度随机变化(免疫阳性和免疫阴性),对Ki-67评分进行人工/主观评估容易出错且费时。因此,已经报道了几种机器学习方法。但是,他们都没有从事基于深度学习的热点检测和扩散评分。在本文中,我们提出了一种先进的深度学习模型,用于通过量化乳腺癌免疫组织化学图像中的Ki-67外观来对候选热点进行计算机识别并随后对增殖率进行评分。与现有的Ki-67评分技术不同,我们的方法使用带有期望最大化的Gamma混合模型(GMM)进行种子点检测,斑块选择和深度学习,包括决策层,用于热点检测和扩散评分。实验结果提供了93%的精度,0.88%的查全率和0.91%的F分数。该模型的性能也已与病理学家的手册注释和最近发表的文章进行了比较。将来,提出的深度学习框架将高度可靠,并且对初级和高级病理学家而言非常有用,可以快速有效地进行Ki-67评分。

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