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A New Method for Measuring Deformation of Folding Surfaces during Morphogenesis

机译:测量形态发生过程中折叠表面变形的新方法

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摘要

During morphogenesis, epithelia (cell sheets) undergo complex deformations as they stretch, bend, and twist to form the embryo. Often these changes in shape create multi-valued surfaces that can be problematic for strain measurements. This paper presents a method for quantifying deformation of such surfaces. The method requires four-dimensional spatiotemporal coordinates of a finite number of surface markers, acquired using standard imaging techniques. From the coordinates of the markers, various deformation measures are computed as functions of time and space using straightforward matrix algebra. This method accommodates sparse, randomly scattered marker arrays, with reasonable errors in marker locations. The accuracy of the method is examined for some sample problems with exact solutions. Then, the utility of the method is illustrated by using it to measure surface stretch ratios and shear in the looping heart and developing brain of the early chick embryo. In these examples, microspheres are tracked using optical coherence tomography (OCT). This technique provides a new tool that can be used in studies of the mechanics of morphogenesis.
机译:在形态发生过程中,上皮(细胞片)在伸展,弯曲和扭曲以形成胚胎时会经历复杂的变形。通常,这些形状变化会产生多值曲面,这对于应变测量可能会产生问题。本文提出了一种量化这种表面变形的方法。该方法需要使用标准成像技术获取的有限数量的表面标记的三维时空坐标。使用简单的矩阵代数,从标记的坐标中计算出各种变形度量,作为时间和空间的函数。此方法可容纳稀疏,随机分散的标记数组,并在标记位置中存在合理的误差。对于某些样本问题,使用精确的解决方案检查了该方法的准确性。然后,通过使用该方法测量早期鸡胚的环状心脏和发育中的大脑的表面拉伸比和剪切,来说明该方法的实用性。在这些示例中,使用光学相干断层扫描(OCT)跟踪微球。该技术提供了一种可用于形态发生机理研究的新工具。

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