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A Re-Engineered Software Interface and Workflow for the Open-Source SimVascular Cardiovascular Modeling Package

机译:开源SimVascular心血管建模软件包的重新设计的软件界面和工作流程

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摘要

Patient-specific simulation plays an important role in cardiovascular disease research, diagnosis, surgical planning and medical device design, as well as education in cardiovascular biomechanics. simvascular is an open-source software package encompassing an entire cardiovascular modeling and simulation pipeline from image segmentation, three-dimensional (3D) solid modeling, and mesh generation, to patient-specific simulation and analysis. SimVascular is widely used for cardiovascular basic science and clinical research as well as education, following increased adoption by users and development of a GATEWAY web portal to facilitate educational access. Initial efforts of the project focused on replacing commercial packages with open-source alternatives and adding increased functionality for multiscale modeling, fluid–structure interaction (FSI), and solid modeling operations. In this paper, we introduce a major SimVascular (SV) release that includes a new graphical user interface (GUI) designed to improve user experience. Additional improvements include enhanced data/project management, interactive tools to facilitate user interaction, new boundary condition (BC) functionality, plug-in mechanism to increase modularity, a new 3D segmentation tool, and new computer-aided design (CAD)-based solid modeling capabilities. Here, we focus on major changes to the software platform and outline features added in this new release. We also briefly describe our recent experiences using SimVascular in the classroom for bioengineering education.
机译:特定于患者的模拟在心血管疾病研究,诊断,手术计划和医疗设备设计以及心血管生物力学教育中起着重要作用。 simvascular是一个开源软件包,包括从图像分割,三维(3D)实体建模和网格生成到特定于患者的模拟和分析的整个心血管建模和模拟流程。随着用户越来越多地使用SimVascular,并开发了GATEWAY网站门户以促进教育访问,SimVascular被广泛用于心血管基础科学研究和临床研究以及教育。该项目的最初工作着眼于用开源替代方案替代商业软件包,并增加了用于多尺度建模,流固耦合(FSI)和实体建模操作的功能。在本文中,我们介绍了主要的SimVascular(SV)版本,其中包括旨在改善用户体验的新图形用户界面(GUI)。其他改进包括增强的数据/项目管理,促进用户交互的交互工具,新的边界条件(BC)功能,用于增加模块化的插件机制,新的3D分割工具以及新的基于计算机辅助设计(CAD)的实体建模能力。在这里,我们重点介绍软件平台的重大更改,并概述此新版本中添加的功能。我们还简要介绍了我们在课堂上使用SimVascular进行生物工程教育的最新经验。

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