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Hemostasis Thrombosis and Vascular Biology: A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation

机译:止血血栓形成和血管生物学:稳态和P2Y1活化过程中血小板磷酸肌醇和钙调节的分子信号模型

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摘要

To quantify how various molecular mechanisms are integrated to maintain platelet homeostasis and allow responsiveness to adenosine diphosphate (ADP), we developed a computational model of the human platelet. Existing kinetic information for 77 reactions, 132 fixed kinetic rate constants, and 70 species was combined with electrochemical calculations, measurements of platelet ultrastructure, novel experimental results, and published single-cell data. The model accurately predicted: (1) steady-state resting concentrations for intracellular calcium, inositol 1,4,5-trisphosphate, diacylglycerol, phosphatidic acid, phosphatidylinositol, phosphatidylinositol phosphate, and phosphatidylinositol 4,5-bisphosphate; (2) transient increases in intracellular calcium, inositol 1,4,5-trisphosphate, and Gq-GTP in response to ADP; and (3) the volume of the platelet dense tubular system. A more stringent test of the model involved stochastic simulation of individual platelets, which display an asynchronous calcium spiking behavior in response to ADP. Simulations accurately reproduced the broad frequency distribution of measured spiking events and demonstrated that asynchronous spiking was a consequence of stochastic fluctuations resulting from the small volume of the platelet. The model also provided insights into possible mechanisms of negative-feedback signaling, the relative potency of platelet agonists, and cell-to-cell variation across platelet populations. This integrative approach to platelet biology offers a novel and complementary strategy to traditional reductionist methods.
机译:为了量化如何整合各种分子机制来维持血小板稳态并允许对二磷酸腺苷(ADP)的反应,我们开发了人类血小板的计算模型。现有的有关77个反应的动力学信息,132个固定的动力学速率常数和70个物种与电化学计算,血小板超微结构的测量,新颖的实验结果和已发布的单细胞数据相结合。该模型可准确预测:(1)细胞内钙,肌醇1,4,5-三磷酸,二酰基甘油,磷脂酸,磷脂酰肌醇,磷脂酰肌醇磷酸酯和磷脂酰肌醇4,5-二磷酸酯的稳态静息浓度; (2)响应ADP的细胞内钙,肌醇1,4,5-三磷酸和Gq-GTP的瞬时增加; (3)血小板致密的管状系统的体积。对模型的更严格的测试涉及单个血小板的随机模拟,该模拟显示了响应ADP的异步钙突加行为。模拟准确地再现了所测得的尖峰事件的广泛频率分布,并表明异步尖峰是血小板体积小导致的随机波动的结果。该模型还提供了有关负反馈信号的可能机制,血小板激动剂的相对效力以及跨血小板群体的细胞间差异的见解。这种整合血小板生物学的方法为传统的还原论方法提供了一种新颖且互补的策略。

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