MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization

摘要

>Summary: We present MetaRoute, an efficient search algorithm based on atom mapping rules and path weighting schemes that returns relevant or textbook-like routes between a source and a product metabolite within seconds for genome-scale networks. Its speed allows the algorithm to be used interactively through a web interface to visualize relevant routes and local networks for one or multiple organisms based on data from KEGG.>Availability: .>Contact: >Supplementary information: are available at