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MeltDB 2.0–advances of the metabolomics software system

机译:MeltDB 2.0 –代谢组学软件系统的先进技术

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摘要

>Motivation: The research area metabolomics achieved tremendous popularity and development in the last couple of years. Owing to its unique interdisciplinarity, it requires to combine knowledge from various scientific disciplines. Advances in the high-throughput technology and the consequently growing quality and quantity of data put new demands on applied analytical and computational methods. Exploration of finally generated and analyzed datasets furthermore relies on powerful tools for data mining and visualization.>Results: To cover and keep up with these requirements, we have created MeltDB 2.0, a next-generation web application addressing storage, sharing, standardization, integration and analysis of metabolomics experiments. New features improve both efficiency and effectivity of the entire processing pipeline of chromatographic raw data from pre-processing to the derivation of new biological knowledge. First, the generation of high-quality metabolic datasets has been vastly simplified. Second, the new statistics tool box allows to investigate these datasets according to a wide spectrum of scientific and explorative questions.>Availability: The system is publicly available at . A login is required but freely available.>Contact:
机译:>动机:在最近几年中,研究领域的代谢组学获得了极大的普及和发展。由于其独特的跨学科性,它需要结合来自各种科学学科的知识。高通量技术的进步以及随之而来的数据质量和数量的增长对应用的分析和计算方法提出了新的要求。此外,对最终生成和分析的数据集的探索还依赖于功能强大的数据挖掘和可视化工具。>结果:为了满足并满足这些要求,我们创建了MeltDB 2.0,这是用于存储的下一代Web应用程序,代谢组学实验的共享,标准化,集成和分析。从预处理到新的生物学知识的推导,新功能提高了色谱原始数据整个处理流程的效率和有效性。首先,高质量代谢数据集的生成已大大简化。其次,新的统计工具框可根据广泛的科学和探索性问题来调查这些数据集。>可用性:该系统可从公开获得。需要登录但可以免费使用。>联系方式:

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