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Association mapping in biomedical time series via statistically significant shapelet mining

机译:通过具有统计意义的小波挖掘在生物医学时间序列中进行关联映射

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摘要

MotivationMost modern intensive care units record the physiological and vital signs of patients. These data can be used to extract signatures, commonly known as biomarkers, that help physicians understand the biological complexity of many syndromes. However, most biological biomarkers suffer from either poor predictive performance or weak explanatory power. Recent developments in time series classification focus on discovering shapelets, i.e. subsequences that are most predictive in terms of class membership. Shapelets have the advantage of combining a high predictive performance with an interpretable component—their shape. Currently, most shapelet discovery methods do not rely on statistical tests to verify the significance of individual shapelets. Therefore, identifying associations between the shapelets of physiological biomarkers and patients that exhibit certain phenotypes of interest enables the discovery and subsequent ranking of physiological signatures that are interpretable, statistically validated and accurate predictors of clinical endpoints.
机译:动机大多数现代重症监护病房都会记录患者的生理和生命体征。这些数据可用于提取签名,通常称为生物标记,以帮助医生了解许多综合症的生物学复杂性。但是,大多数生物标志物的预测性能差或解释力弱。时间序列分类的最新发展侧重于发现shapelet,即就类成员身份而言最具预测性的子序列。小形状具有将高预测性能与可解释的成分(形状)相结合的优势。当前,大多数小波发现方法不依靠统计测试来验证单个小波的重要性。因此,鉴定生理生物标志物的小形态与表现出某些感兴趣表型的患者之间的关联使得能够发现和随后对生理学特征进行排序,所述生理学特征是临床终点的可解释,经统计验证和准确的预测指标。

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