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Molecular Characterization of Cultivated Bromeliad Accessions with Inter-Simple Sequence Repeat (ISSR) Markers

机译:具有简单序列间重复(ISSR)标记的凤梨科栽培种的分子特征

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摘要

Bromeliads are of great economic importance in flower production; however little information is available with respect to genetic characterization of cultivated bromeliads thus far. In the present study, a selection of cultivated bromeliads was characterized via inter-simple sequence repeat (ISSR) markers with an emphasis on genetic diversity and population structure. Twelve ISSR primers produced 342 bands, of which 287 (~84%) were polymorphic, with polymorphic bands per primer ranging from 17 to 34. The Jaccard’s similarity ranged from 0.08 to 0.89 and averaged ~0.30 for the investigated bromeliads. The Bayesian-based approach, together with the un-weighted paired group method with arithmetic average (UPGMA)-based clustering and the principal coordinate analysis (PCoA), distinctly grouped the bromeliads from Neoregelia, Guzmania, and Vriesea into three separately clusters, well corresponding with their botanical classifications; whereas the bromeliads of Aechmea other than the recently selected hybrids were not well assigned to a cluster. Additionally, ISSR marker was proven efficient for the identification of hybrids and bud sports of cultivated bromeliads. The findings achieved herein will further our knowledge about the genetic variability within cultivated bromeliads and therefore facilitate breeding for new varieties of cultivated bromeliads in future as well.
机译:凤梨在花卉生产中具有重要的经济意义。然而,到目前为止,关于栽培凤梨科植物的遗传特征的信息很少。在本研究中,通过简单序列间重复(ISSR)标记来表征栽培凤梨科植物的特征,重点是遗传多样性和种群结构。十二个ISSR引物产生342条带,其中287条(〜84%)是多态性的,每个引物的多态性条带范围为17到34。Jaccard的相似度范围为0.08至0.89,平均被研究的凤梨科的〜0.30。基于贝叶斯的方法,再结合基于算术平均值(UPGMA)的非加权成对分组法和主坐标分析(PCoA),将来自Neoregelia,Guzmania和Vriesea的凤梨科分别分为三个独立的集群与其植物分类相对应;而除了最近选择的杂种以外,Aechmea的凤梨科的凤梨科没有很好地分配到一个簇中。此外,事实证明,ISSR标记可用于鉴定栽培凤梨科植物的杂种和芽运动。本文获得的发现将使我们进一步了解栽培凤梨科植物内的遗传变异性,因此也有助于将来培育栽培凤梨科植物新品种。

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