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Staphylococcal Cassette Chromosome mec (SCCmec) Typing of Methicillin-Resistant Staphylococcus aureus Strains Isolated in 11 Asian Countries: a Proposal for a New Nomenclature for SCCmec Elements

机译:在亚洲11个国家中分离的耐甲氧西林金黄色葡萄球菌菌株的金黄色葡萄球菌盒式磁带法(SCCmec)类型:关于SCCmec元素的新命名法的建议

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摘要

A description of staphylococcal cassette chromosome mec (SCCmec) elements carried by 615 methicillin-resistant Staphylococcus aureus (MRSA) strains isolated in 11 Asian countries is reported, and a novel nomenclatural system based on their structures is proposed. The 615 strains were classified as type 3A (370 strains), type 2A (207 strains), type 2B (32 strains), type 1B (1 strain), and nontypeable (5 strains). The previously reported type III SCCmec (DDBJ/EMBL/GenBank accession no. ) carried by the MRSA strain 85/2082 was ascertained to be composed of two SCC elements, type 3A SCCmec and SCCmercury. PCR analysis indicated that 310 of 370 type 3A SCCmec strains carried both SCC elements. These strains were prevalent in eight countries: Thailand, Sri Lanka, Indonesia, Vietnam, Philippines, Saudi Arabia, India, and Singapore. The remaining 60 type 3A SCCmec strains differed with respect to the left extremity polymorphism or to the presence of ccrC. Among these, two were identified as carrying only type 3A SCCmec elements, but their left extremities differed. Type 2A SCCmec strains predominated in Korea and Japan, although the frequency of the presence of ant(4′)-1 gene downstream of mecA varied (53% for Korean strains; 93% for Japanese strains). Various SCCmec elements were identified in the tested strains, and limited numbers were identified by their multilocus sequence typing genotypes. These data suggest that numerous MRSA clones are disseminated in Asian hospitals, and these consist of minor clones that are presumed to have arisen locally and major clones that are presumed to have been introduced from other countries.
机译:描述了在亚洲11个国家中分离出的615株耐甲氧西林金黄色葡萄球菌(MRSA)菌株携带的葡萄球菌盒式染色体mec(SCCmec)元件,并提出了基于其结构的新命名系统。 615株被分为3A型(370株),2A型(207株),2B型(32株),1B型(1株)和不可分型(5株)。确定由MRSA菌株85/2082携带的先前报道的III型SCCmec(DDBJ / EMBL / GenBank登录号)由两个SCC元素组成,即3A SCCmec和SCCmercury。 PCR分析表明,在370个3A型SCCmec菌株中,有310个带有两个SCC元件。这些菌株在八个国家流行:泰国,斯里兰卡,印度尼西亚,越南,菲律宾,沙特阿拉伯,印度和新加坡。其余60种3A型SCCmec菌株在左肢多态性或ccrC的存在方面有所不同。其中,有两个被确定仅携带3A型SCCmec元件,但它们的左肢不同。 2A型SCCmec菌株在韩国和日本占主导地位,尽管在mecA下游出现ant(4')-1基因的频率有所不同(韩国菌株为53%;日本菌株为93%)。在测试的菌株中鉴定出各种SCCmec元件,并通过其多基因座序列分型基因型鉴定出有限的数量。这些数据表明,许多MRSA克隆在亚洲医院中传播,并且由假定是本地产生的次要克隆和假定是从其他国家引入的主要克隆组成。

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