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Distribution of Legionella Species from Environmental Water Sources of Public Facilities and Genetic Diversity of L. pneumophila Serogroup 1 in South Korea

机译:韩国公共设施的环境水中军团菌种类分布和嗜肺乳杆菌血清群1的遗传多样性

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摘要

A total of 560 Legionella species were isolated from environmental water sources from public facilities from June to September 2008 throughout South Korea. The distribution of Legionella isolates was investigated according to geographical region, facility type, and sample type. The genetic diversity of 104 isolates of Legionella pneumophila serogroup 1 (sg 1) was analyzed by sequence-based typing (SBT). L. pneumophila was distributed broadly throughout Korea, accounting for 85.0% of the isolates, and L. pneumophila sg 1 predominated in all of the public facilities except for the springs. Legionella anisa and Legionella bozemanii predominated among non-L. pneumophila species (48.1% and 21.0%, respectively). The second most dominant strain differed depending on the facility type: L. anisa was the second most dominant strain in the buildings (10.8%), L. pneumophila sg 5 in public baths (21.6%), L. pneumophila sg 6 in factories (12.0%), and L. pneumophila sg 7 in hospitals (13.1%). In the SBT analysis, 104 L. pneumophila sg 1 isolates were differentiated into 26 sequence types (STs) and categorized into 3 clonal groups (CGs) and 10 singleton STs via the eBURST V3 program. ST1, a potential founder of major CG1, was commonly distributed (48.1%). The dominant ST in hot water was ST-K1 (7, 12, 17, 3, 35, 11, 11), which was designated in this study (36.1%). The second most dominant strain differed depending on the type of facility from which the samples were obtained. The unique allelic profile of ST-K1, obtained from hot water, was not found in the European Working Group for Legionella Infections (EWGLI) SBT database.
机译:2008年6月至2008年9月,从韩国公共设施的环境水源中总共分离出560种军团菌。根据地理区域,设施类型和样本类型调查了军团菌分离株的分布。通过基于序列的分型(SBT)分析了104株嗜肺军团菌血清群1(sg 1)的遗传多样性。肺炎链球菌在韩国广泛分布,占分离株的85.0%,除春季以外,所有公共设施中均以肺炎链球菌sg 1为主。在非L型中,军团菌和无军团菌占主导地位。肺炎物种(分别为48.1%和21.0%)。第二最主要的菌株根据设施类型的不同而有所不同:anisa菌株是建筑物中第二主要的菌株(10.8%),公共浴室的肺炎杆菌L.sg 5(21.6%),工厂中的肺炎杆菌L.sg 6( 12.0%)和医院中的肺炎链球菌sg 7(13.1%)。在SBT分析中,通过eBURST V3程序,将104株嗜肺乳杆菌sg 1分离株分为26个序列类型(ST),并分为3个克隆组(CG)和10个单例ST。 ST1是主要CG1的潜在创始人,分布广泛(48.1%)。热水中主要的ST是ST-K1(7、12、17、3、35、11、11),在本研究中为ST-K1(36.1%)。第二个最主要的应变因获取样本的设施类型而异。在欧洲军团菌感染工作组(EWGLI)SBT数据库中找不到从热水中获得的ST-K1独特的等位基因概况。

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