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Freeze-Thaw Tolerance and Clues to the Winter Survival of a Soil Community

机译:冻融耐受性和线索对土壤群落冬季存活的影响

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摘要

Although efforts have been made to sample microorganisms from polar regions and to investigate a few of the properties that facilitate survival at freezing or subzero temperatures, soil communities that overwinter in areas exposed to alternate freezing and thawing caused by Foehn or Chinook winds have been largely overlooked. We designed and constructed a cryocycler to automatically subject soil cultures to alternating freeze-thaw cycles. After 48 freeze-thaw cycles, control Escherichia coli and Pseudomonas chlororaphis isolates were no longer viable. Mixed cultures derived from soil samples collected from a Chinook zone showed that the population complexity and viability were reduced after 48 cycles. However, when bacteria that were still viable after the freeze-thaw treatments were used to obtain selected cultures, these cultures proved to be >1,000-fold more freeze-thaw tolerant than the original consortium. Single-colony isolates obtained from survivors after an additional 48 freeze-thaw cycles were putatively identified by 16S RNA gene fragment sequencing. Five different genera were recognized, and one of the cultures, Chryseobacterium sp. strain C14, inhibited ice recrystallization, a property characteristic of antifreeze proteins that prevents the growth of large, potentially damaging ice crystals at temperatures close to the melting temperature. This strain was also notable since cell-free medium derived from cultures of it appeared to enhance the multiple freeze-thaw survival of another isolate, Enterococcus sp. strain C8. The results of this study and the development of a cryocycler should allow further investigations into the biochemical and soil community adaptations to the rigors of a Chinook environment.
机译:尽管已经努力从极地采样微生物并研究了一些有助于在冰冻或零度以下温度下生存的特性,但是在因Foehn或Chinook风引起的交替冰冻和融化的地区过冬的土壤群落却被大大忽略了。 。我们设计并构造了一种低温循环仪,可自动使土壤培养物经历交替的冻融循环。经过48次冻融循环后,对照大肠杆菌和绿假单胞菌分离株不再可行。从奇努克地区收集的土壤样品中提取的混合培养物显示,经过48个循环后,种群的复杂性和生存能力降低。但是,当使用冻融处理后仍能存活的细菌来获得选定的培养物时,这些培养物的冻融耐受性比原始财团高出1,000倍以上。通过16S RNA基因片段测序推论确定了在另外48个冻融循环后从幸存者获得的单菌落分离物。认识到五个不同的属,其中一种培养物,Chryseobacterium sp.。菌株C14抑制了冰的再结晶,这是防冻蛋白的一种特性,可防止大的,可能损坏的冰晶在接近融化温度的温度下生长。该菌株也很引人注目,因为源自其培养物的无细胞培养基似乎可以增强另一种分离菌肠球菌sp。的多次冻融存活。菌株C8。这项研究的结果以及低温冷冻机的开发,应使人们可以进一步研究其对契努克族环境的严苛条件下的生化和土壤群落适应性。

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