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Limiting Energy Dissipation Induces Glassy Kinetics in Single-Cell High-Precision Responses

机译:限制能量耗散在单细胞高精度反应中诱导玻璃态动力学。

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摘要

Single cells often generate precise responses by involving dissipative out-of-thermodynamic-equilibrium processes in signaling networks. The available free energy to fuel these processes could become limited depending on the metabolic state of an individual cell. How does limiting dissipation affect the kinetics of high-precision responses in single cells? I address this question in the context of a kinetic proofreading scheme used in a simple model of early-time T cell signaling. Using exact analytical calculations and numerical simulations, I show that limiting dissipation qualitatively changes the kinetics in single cells marked by emergence of slow kinetics, large cell-to-cell variations of copy numbers, temporally correlated stochastic events (dynamic facilitation), and ergodicity breaking. Thus, constraints in energy dissipation, in addition to negatively affecting ligand discrimination in T cells, can create a fundamental difficulty in determining single-cell kinetics from cell-population results.
机译:单细胞通常通过在信号网络中涉及耗散的热力学平衡过程来产生精确的反应。取决于单个细胞的代谢状态,为这些过程提供燃料的可用自由能可能会受到限制。限制耗散如何影响单细胞中高精度反应的动力学?我在早期T细胞信号转导的简单模型中使用的动力学校对方案的背景下解决了这个问题。使用精确的分析计算和数值模拟,我证明了限制耗散从质上改变了单个细胞的动力学,其特点是出现了缓慢的动力学,大量的细胞间拷贝数变化,时间相关的随机事件(动态促进)和遍历性破坏。因此,除了对T细胞中的配体歧视产生负面影响外,能量耗散的限制还可能造成从细胞种群结果确定单细胞动力学的根本困难。

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