首页> 美国卫生研究院文献>Proceedings of the Royal Society B: Biological Sciences >Phylogeography and population history of Atlantic mackerel (Scomber scombrus L.): a genealogical approach reveals genetic structuring among the eastern Atlantic stocks.
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Phylogeography and population history of Atlantic mackerel (Scomber scombrus L.): a genealogical approach reveals genetic structuring among the eastern Atlantic stocks.

机译:大西洋鲭鱼(Scomber scombrus L.)的系统记录和种群历史:系谱学方法揭示了东部大西洋种群之间的遗传结构。

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摘要

Despite the resolving power of DNA markers, pelagic and migratory marine fish species generally show very little geographical population structuring. In mackerel (Scomber scombrus L.) population differentiation has been detected only at a transatlantic scale. By applying two regions in mitochondrial DNA (mtDNA) (D-loop and cytochrome b (cytb)) in combination with genealogical and frequency-based statistical approaches, our data suggest population differentiation among eastern Atlantic spawning stocks. In contrast, and indicative of homing behaviour, no genetic structuring was observed among shoals of individuals outside the spawning season. Among spawning stocks, mtDNA D-loop sequences detected differentiation within the eastern Atlantic, while the cytb gene detected transatlantic differentiation. The impact of recurrent events (e.g. gene flow restricted by isolation by distance) and historic events (e.g. population range expansions) among spawning stocks was investigated applying a nested cladistic analysis of geographical distribution of cytb haplotype lineages. In the eastern Atlantic, historical population range expansion, presumably in connection with recolonization of northern areas after the last glaciation, is suggested to be the main factor determining mtDNA lineage distribution. This was supported by estimates of mtDNA nucleotide diversity, where the highest diversity was observed for the stock spawning in the Bay of Biscay, for which the size estimate is only 15% of the largest stock (Celtic Sea). In addition to revealing population differentiation, our data demonstrate the importance of sampling strategy and the power of applying statistical methods addressing both ongoing and historical population processes.
机译:尽管具有DNA标记的分辨能力,但远洋和迁徙海洋鱼类物种总体上却很少显示地理结构。在鲭鱼(Scomber scombrus L.)中,仅在跨大西洋范围内才发现种群分化。通过应用线粒体DNA(mtDNA)的两个区域(D环和细胞色素b(cytb)),结合基于谱系和频率的统计方法,我们的数据表明东部大西洋产卵种群之间存在种群差异。相反,作为产卵行为的指示,在产卵季节以外的个体的浅滩中未观察到遗传结构。在产卵种群中,mtDNA D-loop序列检测到了东大西洋内部的分化,而cytb基因检测到了跨大西洋的分化。应用巢式单胞菌对cytb单倍型谱系的地理分布进行了分析,研究了产卵种群中复发事件(例如受距离隔离限制的基因流)和历史事件(例如种群范围扩展)的影响。在大西洋东部,历史人口范围的扩大,可能与最后一次冰期之后北部地区的重新殖民化有关,被认为是决定mtDNA谱系分布的主要因素。 mtDNA核苷酸多样性的估计支持了这一点,在比斯开湾产卵的种群观察到最高的多样性,其大小估计仅是最大种群(凯尔特海)的15%。除了揭示人口差异之外,我们的数据还证明了抽样策略的重要性以及应用针对当前和历史人口过程的统计方法的作用。

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