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Establishing conditions for the storage and elution of rabies virus RNA usingFTA® cards

机译:建立狂犬病毒RNA的储存和洗脱条件FTA®卡

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摘要

The Flinders Technology Associates filter paper cards (FTA® cards) can be used to store nucleic acid from various samples and are easily portable. However, RNA is physicochemically unstable compared with DNA, and appropriate methods have not been established for storage and extraction of RNA from FTA® cards. The present study investigated the optimum conditions for storage and elution of viral RNA (vRNA) using rabies virus (RABV) applied to FTA® cards. When TE buffer was used, the elution rates of vRNA increased with the length of the elution time. When the cards were stored at −80°C or −20°C, vRNA was stable over 3 months. Degradation of vRNAs occurred following storage at 4°C and room temperature, suggesting that RNA should be extracted from cards as soon as possible if no freezer is available. When we tried to amplify vRNA from RABV-infected animal brains applied to FTA® cards and stored at −80°C for 6 months, we did not detect any amplified products with the primer set for 964 bp of RABV N gene. However, we were able to detect amplified products by increasing the elution time of vRNA from FTA® cards from 30 min to 24 hr or by changing the primer sets to amplify 290 bp of N gene. Thus, we recommend extending the elution time for damaged or low concentration samples in FTA® cards.
机译:Flinders Technology Associates滤纸卡(FTA ®卡)可用于存储各种样品中的核酸,并且易于携带。然而,与DNA相比,RNA在物理化学上不稳定,因此尚未建立适当的方法来从FTA ®卡中存储和提取RNA。本研究探讨了在FTA ®卡上使用狂犬病病毒(RABV)来储存和洗脱病毒RNA(vRNA)的最佳条件。当使用TE缓冲液时,vRNA的洗脱速率随洗脱时间的延长而增加。当卡在-80°C或-20°C下存储时,vRNA在3个月内稳定。在4°C和室温下存储后,vRNA发生降解,这表明如果没有可用的冰箱,应尽快从卡中提取RNA。当我们尝试从应用FTA ®卡并经−80°C保存6个月的受RABV感染的动物脑中扩增vRNA时,我们未检测到964 bp引物对的任何扩增产物。 RABV N基因。但是,我们可以通过将FTA ®卡上的vRNA的洗脱时间从30分钟增加到24小时或通过改变引物组以扩增290 bp的N基因来检测扩增产物。因此,我们建议延长FTA ®卡中受损或低浓度样品的洗脱时间。

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