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Development of a novel TaqMan-based real-time PCR assay for the detection of porcine boca-like virus (Pbo-likeV)

机译:基于TaqMan的新型实时PCR检测试剂盒的开发用于检测猪博卡样病毒(Pbo-likeV)

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摘要

The recently discovered porcine boca-like virus (Pbo-likeV) is a member of the Parvoviridae family, genus Bocavirus, and it is potentially associated with swine disease. Several studies have associated Pbo-likeV with postweaning multisystemic wasting syndrome in pigs, but the full spectrum of clinical disease and the epidemiology of Pbo-likeV infection remain unclear. The availability of rapid and reliable molecular diagnostics would aid future studies of this novel virus. Thus, we developed a sensitive and specific TaqMan-based real-time PCR assay to target the Pbo-likeV NP1 gene. The assay reproducibly detected 20 copies of a recombinant DNA plasmid containing the NP1 gene, with a dynamic range of six orders of magnitude (102-107 copies). The assay did not cross-react with other animal viruses. Clinical evaluation found that Pbo-likeV was present in Chinese swine herds at a frequency of 44.2% (114/258). Higher infection rates were found in diseased pigs (56.1%, 101/180) compared with healthy pigs (16.7%, 13/78) (P < 0.05). Our assay for the diagnosis and quantification of Pbo-likeV was highly sensitive and specific, and should provide a reliable real-time tool for epidemiological and pathogenetic study of Pbo-likeV infection.
机译:最近发现的猪博卡样病毒(Pbo-likeV)是细小病毒科的一部分,属于博卡病毒属,可能与猪疾病有关。几项研究已将Pbo-likeV与猪断奶后多系统消耗综合症相关联,但临床疾病的全谱和Pbo-likeV感染的流行病学仍不清楚。快速可靠的分子诊断技术的可用性将有助于对该新型病毒的进一步研究。因此,我们开发了一种基于TaqMan的灵敏且特异性的实时PCR分析法,以靶向Pbo-likeV NP1基因。该测定法可再现地检测到20个拷贝的,包含NP1基因的重组DNA质粒,其动态范围为六个数量级(10 2 -10 7 份)。该测定法未与其他动物病毒发生交叉反应。临床评估发现,中国猪群中存在Pbo-likeV的频率为44.2%(114/258)。与健康猪(16.7%,13/78)相比,患病猪(56.1%,101/180)的感染率更高(P <0.05)。我们对Pbo-likeV的诊断和定量分析具有很高的敏感性和特异性,应该为Pbo-likeV感染的流行病学和致病性研究提供可靠的实时工具。

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