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Inaugural Article: Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma

机译:就职文章:睡美人诱变揭示了胰腺腺癌中的协同突变和途径

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摘要

Pancreatic cancer is one of the most deadly cancers affecting the Western world. Because the disease is highly metastatic and difficult to diagnosis until late stages, the 5-y survival rate is around 5%. The identification of molecular cancer drivers is critical for furthering our understanding of the disease and development of improved diagnostic tools and therapeutics. We have conducted a mutagenic screen using Sleeping Beauty (SB) in mice to identify new candidate cancer genes in pancreatic cancer. By combining SB with an oncogenic Kras allele, we observed highly metastatic pancreatic adenocarcinomas. Using two independent statistical methods to identify loci commonly mutated by SB in these tumors, we identified 681 loci that comprise 543 candidate cancer genes (CCGs); 75 of these CCGs, including Mll3 and Ptk2, have known mutations in human pancreatic cancer. We identified point mutations in human pancreatic patient samples for another 11 CCGs, including Acvr2a and Map2k4. Importantly, 10% of the CCGs are involved in chromatin remodeling, including Arid4b, Kdm6a, and Nsd3, and all SB tumors have at least one mutated gene involved in this process; 20 CCGs, including Ctnnd1, Fbxo11, and Vgll4, are also significantly associated with poor patient survival. SB mutagenesis provides a rich resource of mutations in potential cancer drivers for cross-comparative analyses with ongoing sequencing efforts in human pancreatic adenocarcinoma.
机译:胰腺癌是影响西方世界的最致命的癌症之一。由于该疾病具有高度转移性且难以诊断到晚期,因此5年生存率约为5%。分子癌驱动因子的识别对于加深我们对疾病的了解以及改进诊断工具和治疗方法的开发至关重要。我们已经在小鼠中使用Sleeping Beauty(SB)进行了诱变筛选,以鉴定胰腺癌中新的候选癌症基因。通过将SB与致癌Kras等位基因结合,我们观察到高度转移性胰腺腺癌。使用两种独立的统计方法来鉴定在这些肿瘤中通常由SB突变的基因座,我们鉴定了681个基因座,其中包括543个候选癌症基因(CCG)。这些CCG中有75种,包括Mll3和Ptk2,在人类胰腺癌中具有已知的突变。我们确定了人类胰腺患者样品中另外11种CCG(包括Acvr2a和Map2k4)的点突变。重要的是,有10%的CCG参与了染色质重塑,包括Arid4b,Kdm6a和Nsd3,并且所有SB肿瘤都至少有一个突变基因参与了这一过程。包括Ctnnd1,Fbxo11和Vgll4在内的20种CCG也与患者生存不良相关。 SB 诱变为潜在的癌症驱动因素提供了丰富的突变资源,可用于交叉比较分析以及人类胰腺癌正在进行的测序工作。

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