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Tuning DNA strings: Modulating the rate of DNA replication with mechanical tension

机译:调节DNA弦:通过机械张力调节DNA复制的速率

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摘要

Recent experiments have measured the rate of replication of DNA catalyzed by a single enzyme moving along a stretched template strand. The dependence on tension was interpreted as evidence that T7 and related DNA polymerases convert two (n = 2) or more single-stranded template bases to double helix geometry in the polymerization site during each catalytic cycle. However, we find structural data on the T7 enzyme–template complex indicate n = 1. We also present a model for the “tuning” of replication rate by mechanical tension. This model considers only local interactions in the neighborhood of the enzyme, unlike previous models that use stretching curves for the entire polymer chain. Our results, with n = 1, reconcile force-dependent replication rate studies with structural data on DNA polymerase complexes.
机译:最近的实验已经测量了由单一酶沿着延伸的模板链移动所催化的DNA复制速率。对张力的依赖被认为是在每个催化循环中T7和相关的DNA聚合酶在聚合位点将两个(n = 2)或更多的单链模板碱基转化为双螺旋几何结构的证据。但是,我们发现有关T7酶-模板复合物的结构数据表明n =1。我们还提出了通过机械张力“调节”复制速率的模型。该模型仅考虑了酶附近的局部相互作用,这与之前的模型对整个聚合物链使用拉伸曲线不同。我们的结果(n = 1)与调和力有关的复制速率研究与DNA聚合酶复合物的结构数据有关。

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