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PCR-RFLP patterns of four isolates of Trichinella for rDNA ITS1 region

机译:四种旋毛虫的rDNA ITS1区域的PCR-RFLP模式

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摘要

We have studied the genetic differences among four isolates of Trichinella including a new strain of Trichinella spiralis (ISS 623) recently found from a human case who took a badger in Korea. Because they have a different host origin and came from geographically separated regions, we supposed the genetic pattern of the isolates might be different as had been previously reported. It was analysed by PCR-RFLP analysis of the rDNA repeat that can readily distinguish a species or strain from others. Isolated genomic DNA of each isolate of Trichinella larvae was amplified with ITS1 specific primers and digested with restriction endonucleases. The PCR product of ITS1 was confirmed using Southern blot analysis to be a 910 bp fragment. The restriction fragments of each isolate had variable patterns when it was digested with Rsa I only. According to the RFLP patterns, the estimated genetic divergence between each isolate was different. In conclusion, four isolates of Trichinella including a new strain of T. spiralis obtained from a Korean patient may have genetic differences in the ITS1 region and the Shanghai isolate was genetically more similar to the Japanese unknown isolate than others in the ITS1 region.
机译:我们研究了四种旋毛虫的遗传差异,其中包括最近在韩国发现的一只case的人类病例中发现的一种新旋毛虫(ISS 623)。因为它们具有不同的寄主来源,并且来自地理上分开的区域,所以我们认为这些分离株的遗传模式可能与以前报道的有所不同。通过rDNA重复序列的PCR-RFLP分析,可以轻松地区分物种或菌株。用ITS1特异性引物扩增旋毛虫幼虫每个分离物的分离基因组DNA,并用限制性核酸内切酶消化。使用Southern印迹分析确认ITS1的PCR产物是910bp的片段。当仅用Rsa I消化时,每个分离物的限制性片段具有可变的模式。根据RFLP模式,每个分离株之间的估计遗传差异是不同的。总之,从一名韩国患者那里获得的包括旋毛虫新菌株在内的四种旋毛虫分离株可能在IT​​S1区具有遗传差异,而上海分离株与日本未知株在遗传上比ITS1区中的相似。

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