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A comparison of continuous- and discrete- time three-state models for rodent tumorigenicity experiments.

机译:啮齿动物致瘤性实验的连续和离散时间三态模型的比较。

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摘要

The three-state illness-death model provides a useful way to characterize data from a rodent tumorigenicity experiment. Most parametrizations proposed recently in the literature assume discrete time for the death process and either discrete or continuous time for the tumor onset process. We compare these approaches with a third alternative that uses a piecewise continuous model on the hazards for tumor onset and death. All three models assume proportional hazards to characterize tumor lethality and the effect of dose on tumor onset and death rate. All of the models can easily be fitted using an Expectation Maximization (EM) algorithm. The piecewise continuous model is particularly appealing in this context because the complete data likelihood corresponds to a standard piecewise exponential model with tumor presence as a time-varying covariate. It can be shown analytically that differences between the parameter estimates given by each model are explained by varying assumptions about when tumor onsets, deaths, and sacrifices occur within intervals. The mixed-time model is seen to be an extension of the grouped data proportional hazards model [Mutat. Res. 24:267-278 (1981)]. We argue that the continuous-time model is preferable to the discrete- and mixed-time models because it gives reasonable estimates with relatively few intervals while still making full use of the available information. Data from the ED01 experiment illustrate the results.
机译:三态疾病死亡模型提供了一种有用的方法来表征来自啮齿动物致瘤性实验的数据。最近在文献中提出的大多数参数化假设死亡过程的离散时间,以及肿瘤发作过程的离散时间或连续时间。我们将这些方法与第三种方法进行比较,该方法使用分段连续模型来分析肿瘤发作和死亡的危害。所有这三个模型均假设存在比例危险,以表征肿瘤致死率以及剂量对肿瘤发作和死亡率的影响。使用期望最大化(EM)算法可以轻松拟合所有模型。在这种情况下,分段连续模型特别有吸引力,因为完整的数据似然性对应于标准分段指数模型,其中肿瘤的存在为时变协变量。可以通过分析表明,每个模型给出的参数估计值之间的差异是通过对肿瘤发作,死亡和牺牲何时在一定间隔内发生的各种假设进行解释的。混合时间模型被视为对分组数据比例风险模型的扩展。 Res。 24:267-278(1981)]。我们认为,连续时间模型优于离散时间模型和混合时间模型,因为它以相对较少的间隔给出了合理的估计,同时仍然充分利用了可用信息。 ED01实验的数据说明了结果。

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