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Mutations of the intronic IgH enhancer and its flanking sequences differentially affect accessibility of the JH locus.

机译:内含子IgH增强子及其侧翼序列的突变差异地影响JH基因座的可及性。

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摘要

To investigate the role of intronic immunoglobulin heavy chain (IgH) enhancer (E mu) in generating accessibility of the JH locus for VDJ recombination, we generated ES cells in which E mu or its flanking sequences were mutated by replacement with or insertion of an expressed neor gene. Heterozygous mutant ES cells were used to generate chimeric mice from which pre-B cell lines were derived by transformation of bone marrow cells with Abelson murine leukemia virus (A-MuLV). Comparison of the rearrangement status of the normal and mutated alleles in individual pre-B cell lines allowed us to assay for cis-acting effects of the mutations. Replacement of a 700 bp region immediately downstream from the core E mu [which includes part of the 3' matrix associated region (MAR) and the I mu exon] had no obvious effect on rearrangement of the targeted allele, indicating that insertion of a transcribed neor gene into the JH-C mu intron does not affect JH accessibility. In contrast, replacement of an overlapping 1 kb DNA fragment that contains the E mu resulted in a dramatic cis-acting inhibition of rearrangement, demethylation and germline transcription of the associated JH locus. Surprisingly, insertion of the neor gene into the 5' MAR sequence approximately 100 bp upstream of the core E mu also dramatically decreased recombination of the linked JH locus; but, in many lines, did not prevent demethylation of this locus. We conclude that integrity of the E mu and upstream flanking sequences is required for efficient rearrangement of the JH locus and that demethylation of this locus, per se, does not necessarily make it a good substrate for VDJ recombination.
机译:为了研究内含子免疫球蛋白重链(IgH)增强子(E mu)在产生JH基因座进行VDJ重组的可及性中的作用,我们生成了ES细胞,其中E mu或其侧翼序列通过替换或插入表达而发生突变新基因。杂合突变体ES细胞用于产生嵌合小鼠,通过用Abelson鼠白血病病毒(A-MuLV)转化骨髓细胞从中获得pre-B细胞系。比较各个pre-B细胞系中正常和突变等位基因的重排状态,使我们能够检测突变的顺式作用。紧接核心E mu [包括3'基质相关区域(MAR)和I mu外显子的一部分)下游的700 bp区域的替换对目标等位基因的重排没有明显影响,表明转录的插入进入JH-C mu内含子的新基因不影响JH可及性。相比之下,替换包含E mu的重叠的1 kb DNA片段会导致相关JH基因座的重排,去甲基化和种系转录受到明显的顺式作用抑制。出人意料的是,将neor基因插入到核心E mu上游约100 bp的5'MAR序列中也大大降低了所连接的JH基因座的重组。但是,在许多方面,并不能阻止该基因座的去甲基化。我们得出结论,J H基因座的有效重排需要E mu和上游侧翼序列的完整性,并且该基因座的去甲基化本身并不一定使其成为VDJ重组的良好底物。

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