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A Flow Cytometry Protocol to Estimate DNA Content in the Yellowtail Tetra Astyanax altiparanae

机译:流式细胞仪协议以估计Yellow鱼四叶连翘中的DNA含量

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摘要

The production of triploid yellowtail tetra Astyanax altiparanae is a key factor to obtain permanently sterile individuals by chromosome set manipulation. Flow cytometric analysis is the main tool for confirmation of the resultant triploids individuals, but very few protocols are specific for A. altiparanae species. The current study has developed a protocol to estimate DNA content in this species. Furthermore, a protocol for long-term storage of dorsal fins used for flow cytometry analysis was established. The combination of five solutions with three detergents (Nonidet P-40 Substitute, Tween 20, and Triton X-100) at 0.1, 0.2, and 0.4% concentration was evaluated. Using the best solution from this first experiment, the addition of trypsin (0.125, 0.25, and 0.5%) and sucrose (74 mM) and the effects of increased concentrations of the detergents at 0.6 and 1.2% concentration were also evaluated. After adjustment of the protocol for flow cytometry, preservation of somatic tissue or isolated nuclei was also evaluated by freezing (at −20°C) and fixation in saturated NaCl solution, acetic methanol (1:3), ethanol, and formalin at 10% for 30 or 60 days of storage at 25°C. Flow cytometry analysis in yellowtail tetra species was optimized using the following conditions: lysis solution: 9.53 mM MgCl2.7H20; 47.67 mM KCl; 15 mM Tris; 74 mM sucrose, 0.6% Triton X-100, pH 8.0; staining solution: Dulbecco's PBS with DAPI 1 μg mL−1; preservation procedure: somatic cells (dorsal fin samples) frozen at −20°C. Using this protocol, samples may be stored up to 60 days with good accuracy for flow cytometry analysis.
机译:三倍体yellow鱼四头草的生产是通过染色体组操作获得永久不育个体的关键因素。流式细胞仪分析是确认所得三倍体个体的主要工具,但是很少有特定于拟南芥物种的规程。当前的研究已经开发出一种协议来估计该物种中的DNA含量。此外,建立了用于流式细胞仪分析的背鳍长期保存的协议。评价了五种溶液与三种去污剂(Nonidet P-40替代品,Tween 20和Triton X-100)的浓度分别为0.1%,0.2%和0.4%。使用该第一个实验的最佳溶液,还评估了添加胰蛋白酶(0.125、0.25和0.5%)和蔗糖(74 mM)的效果,以及在0.6%和1.2%浓度下增加洗涤剂浓度的效果。调整流式细胞仪操作规程后,还通过冷冻(在-20°C下)并固定在饱和NaCl溶液,乙酸甲醇(1:3),乙醇和福尔马林(浓度为10%)中来评估体细胞组织或分离的核的保存在25°C下可存放30或60天。使用以下条件优化yellow鱼四菌种的流式细胞术分析:裂解液:9.53 mM MgCl2.7H20; 47.67 mM氯化钾; 15 mM Tris; 74 mM蔗糖,0.6%Triton X-100,pH 8.0;染色溶液:Dulbecco PBS,DAPI 1μgmL -1 ;保存程序:将体细胞(背鳍样品)冷冻在-20℃。使用该协议,可以将样品准确保存长达60天,以用于流式细胞仪分析。

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