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Identification of Transcription Factors Involved in the Regulation of Flowering in Adonis Amurensis Through Combined RNA-seq Transcriptomics and iTRAQ Proteomics

机译:通过RNA-seq转录组学和iTRAQ蛋白质组学的结合鉴定紫花苜蓿开花调控的转录因子

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摘要

Temperature is one of the most important environmental factors affecting flowering in plants. Adonis amurensis, a perennial herbaceous flower that blooms in early spring in northeast China where the temperature can drop to −15 °C, is an ideal model for studying the molecular mechanisms of flowering at extremely low temperatures. This study first investigated global gene expression profiles at different developmental stages of flowering in A. amurensis by RNA-seq transcriptome and iTRAQ proteomics. Finally, 123 transcription factors (TFs) were detected in both the transcriptome and the proteome. Of these, 66 TFs belonging to 14 families may play a key role in multiple signaling pathways of flowering in A. amurensis. The TFs FAR1, PHD, and B3 may be involved in responses to light and temperature, while SCL, SWI/SNF, ARF, and ERF may be involved in the regulation of hormone balance. SPL may regulate the age pathway. Some members of the TCP, ZFP, MYB, WRKY, and bHLH families may be involved in the transcriptional regulation of flowering genes. The MADS-box TFs are the key regulators of flowering in A. amurensis. Our results provide a direction for understanding the molecular mechanisms of flowering in A. amurensis at low temperatures.
机译:温度是影响植物开花的最重要的环境因素之一。 Adonis amurensis是多年生草本植物花,在中国东北的早春开花,温度可降至-15°C,是研究极低温下开花的分子机制的理想模型。这项研究首先通过RNA-seq转录组和iTRAQ蛋白质组学研究了A. amurensis开花不同发育阶段的全球基因表达谱。最终,在转录组和蛋白质组中均检测到123个转录因子(TF)。其中,属于14个科的66个TF可能在A. amurensis的多个开花信号通路中发挥关键作用。 TFs FAR1,PHD和B3可能参与对光和温度的反应,而SCL,SWI / SNF,ARF和ERF可能参与激素平衡的调节。 SPL可能调节年龄途径。 TCP,ZFP,MYB,WRKY和bHLH家族的某些成员可能参与开花基因的转录调控。 MADS-box TFs是A. amurensis开花的关键调控因子。我们的结果为理解低温下A. amurensis开花的分子机制提供了方向。

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