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Genetic identification of marine eels through DNA barcoding from Parangipettai coastal waters

机译:通过Parangipettai沿海水域的DNA条码对海鳗进行遗传鉴定

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摘要

Anguilliformes, also known as “true eels”, are an ecologically diverse group of predominantly marine origin whose members were easily recognized by their extremely elongated bodies with reduced cross-sectional areas and universal lack of pelvic fins. The Marine Eels were collected from landing centres of Parangipettai coastal waters and identified based on their morphometric and meristic characters. The newly recorded species were used for the barcoding analysis. Information on molecular taxonomy of marine eels was very meagre and hence, the present study was aimed to study the barcoding of marine eels which were present along the southeast coast of India. The cube of lateral muscle was exercised for DNA isolation followed by its amplification. Cluster IX 2.06 was used to align the nucleotide sequences (Thomson, 1997). The evolutionary history was inferred using the Neighbor-Joining method (Saitou and Nei, 1987). The evolutionary distances were computed using the Maximum Composite Likelihood method (Tamura et al., 2004). The barcodes sequences were submitted in NCBI (National centre for Biotechnological Information). The species within genera of Muraenidae, Muraenesocidae and Ophichthidae family were clustered in a same clade with high bootstrap value. The evolutionary relationships of six species were analyzed using neighbor joining method. This results of phylogenetic tree showed maximum genetic relatedness with the sequenced results which were submitted in gene bank.
机译:Anguilliformes,也被称为“真鳗鱼”,是一个生态多样化的群体,主要是海洋生物,其成员很容易被其极长的体形,横截面积减小和普遍缺乏骨盆鳍所识别。海鳗是从Parangipettai沿海水域的着陆中心收集的,并根据它们的形态和特征特征进行了识别。新记录的物种用于条形码分析。有关海鳗的分子分类学的信息非常少,因此,本研究旨在研究印度东南沿海存在的海鳗的条形码。锻炼方肌立方体进行DNA分离,然后进行扩增。簇IX 2.06用于比对核苷酸序列(Thomson,1997)。进化史是用Neighbor-Joining方法推论的(Saitou和Nei,1987)。进化距离是使用最大合成似然法(Tamura等,2004)来计算的。条形码序列已在NCBI(国家生物技术信息中心)提交。 Muraenidae,Muraenesocidae和Ophichthidae科的属内的物种聚集在具有高自举值的同一进化枝中。利用邻居加入法分析了六个物种的进化关系。系统发育树的结果显示出与基因库中提交的测序结果具有最大的遗传相关性。

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