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Global population genetic structure and male-mediated gene flow in the green sea turtle (Chelonia mydas): analysis of microsatellite loci.

机译:绿海龟(Chelonia mydas)中的全球种群遗传结构和雄性介导的基因流:微卫星基因座的分析。

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摘要

We assessed the degree of population subdivision among global populations of green sea turtles, Chelonia mydas, using four microsatellite loci. Previously, a single-copy nuclear DNA study indicated significant male-mediated gene flow among populations alternately fixed for different mitochondrial DNA haplotypes and that genetic divergence between populations in the Atlantic and Pacific Oceans was more common than subdivisions among populations within ocean basins. Even so, overall levels of variation at single-copy loci were low and inferences were limited. Here, the markedly more variable microsatellite loci confirm the presence of male-mediated gene flow among populations within ocean basins. This analysis generally confirms the genetic divergence between the Atlantic and Pacific. As with the previous study, phylogenetic analyses of genetic distances based on the microsatellite loci indicate a close genetic relationship among eastern Atlantic and Indian Ocean populations. Unlike the single-copy study, however, the results here cannot be attributed to an artifact of general low variability and likely represent recent or ongoing migration between ocean basins. Sequence analyses of regions flanking the microsatellite repeat reveal considerable amounts of cryptic variation and homoplasy and significantly aid in our understanding of population connectivity. Assessment of the allele frequency distributions indicates that at least some of the loci may not be evolving by the stepwise mutation model.
机译:我们使用四个微卫星基因座评估了绿海龟,印度洋斜纹夜蛾全球种群之间的种群细分程度。以前,单拷贝核DNA研究表明,不同线粒体DNA单倍型交替固定的种群之间存在大量男性介导的基因流,大西洋和太平洋种群之间的遗传差异比海盆内种群之间的细分更为普遍。即便如此,单拷贝基因座的总体变异水平仍然很低,推论也受到限制。在这里,微卫星基因座的变化更大,证实了海洋盆地内种群之间存在雄性介导的基因流。该分析通常证实了大西洋与太平洋之间的遗传差异。与以前的研究一样,基于微卫星基因座的遗传距离的系统发育分析表明,东大西洋和印度洋种群之间存在密切的遗传关系。但是,与单份研究不同,这里的结果不能归因于一般的低变异性产物,可能代表了近期或正在进行的海盆之间的迁移。对微卫星重复序列侧翼区域的序列分析显示出相当数量的密码学变异和同质性,并极大地帮助了我们对种群连通性的理解。等位基因频率分布的评估表明,逐步突变模型可能不会进化出至少一些基因座。

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