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Effect of balancing selection on spatial genetic structure within populations: theoretical investigations on the self-incompatibility locus and empirical studies in Arabidopsis halleri

机译:平衡选择对种群空间遗传结构的影响:拟南芥自交不亲和基因座的理论研究和实证研究

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摘要

The effect of selection on patterns of genetic structure within and between populations may be studied by contrasting observed patterns at the genes targeted by selection with those of unlinked neutral marker loci. Local directional selection on target genes will produce stronger population genetic structure than at neutral loci, whereas the reverse is expected for balancing selection. However, theoretical predictions on the intensity of this signal under precise models of balancing selection are still lacking. Using negative frequency-dependent selection acting on self-incompatibility systems in plants as a model of balancing selection, we investigated the effect of such selection on patterns of spatial genetic structure within a continuous population. Using numerical simulations, we tested the effect of the type of self-incompatibility system, the number of alleles at the self-incompatibility locus and the dominance interactions among them, the extent of gene dispersal, and the immigration rate on spatial genetic structure at the selected locus and at unlinked neutral loci. We confirm that frequency-dependent selection is expected to reduce the extent of spatial genetic structure as compared to neutral loci, particularly in situations with low number of alleles at the self-incompatibility locus, high frequency of codominant interactions among alleles, restricted gene dispersal and restricted immigration from outside populations. Hence the signature of selection on spatial genetic structure is expected to vary across species and populations, and we show that empirical data from the literature as well as data reported here on three natural populations of the herb Arabidopsis halleri confirm these theoretical results.
机译:选择对种群内和种群间遗传结构模式的影响可以通过将选择靶基因的观察模式与未连锁的中性标记基因座的观察模式进行对比来研究。与中性基因座相比,靶基因上的局部定向选择将产生更强的种群遗传结构,而平衡选择则预期相反。然而,仍然缺乏在平衡选择的精确模型下对该信号的强度的理论预测。使用负频率依赖性选择作用于植物的自交配系统作为平衡选择的模型,我们调查了这种选择对连续种群内空间遗传结构模式的影响。使用数值模拟,我们测试了自交配系统类型,自交配位点上的等位基因数目以及它们之间的优势相互作用,基因分散的程度以及移民率对个体空间遗传结构的影响。选定的基因座和未连接的中性基因座。我们确认,与中性基因座相比,频率依赖性选择有望减少空间遗传结构的范围,尤其是在自交不亲和基因座处等位基因数量少,等位基因间共价相互作用的频率高,基因分散受限和限制来自外部人口的移民。因此,在空间遗传结构上选择的签名预计会因物种和种群而异,并且我们显示,来自文献的经验数据以及此处报道的关于拟南芥草药三个自然种群的数据证实了这些理论结果。

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