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Integrative analysis of loss-of-function variants in clinical and genomic data reveals novel genes associated with cardiovascular traits

机译:对临床和基因组数据中功能丧失变异的综合分析揭示了与心血管特征相关的新基因

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摘要

BackgroundGenetic loss-of-function variants (LoFs) associated with disease traits are increasingly recognized as critical evidence for the selection of therapeutic targets. We integrated the analysis of genetic and clinical data from 10,511 individuals in the Mount Sinai BioMe Biobank to identify genes with loss-of-function variants (LoFs) significantly associated with cardiovascular disease (CVD) traits, and used RNA-sequence data of seven metabolic and vascular tissues isolated from 600 CVD patients in the Stockholm-Tartu Atherosclerosis Reverse Network Engineering Task (STARNET) study for validation. We also carried out in vitro functional studies of several candidate genes, and in vivo studies of one gene.
机译:背景技术与疾病性状相关的基因功能丧失变异(LoF)被越来越多地视为选择治疗靶点的关键证据。我们整合了来自西奈山BioMe生物库中10,511名个体的遗传和临床数据分析,以鉴定具有与心血管疾病(CVD)性状显着相关的功能缺失变异(LoF)的基因,并使用了七个代谢的RNA序列数据在斯德哥尔摩-塔图动脉粥样硬化逆向网络工程任务(STARNET)研究中从600位CVD患者中分离出的血管组织进行了验证。我们还对几个候选基因进行了体外功能研究,并对一个基因进行了体内研究。

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