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Comparison of statistical algorithms for daily syndromic surveillance aberration detection

机译:日常症状监测畸变检测统计算法的比较

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摘要

MotivationPublic health authorities can provide more effective and timely interventions to protect populations during health events if they have effective multi-purpose surveillance systems. These systems rely on aberration detection algorithms to identify potential threats within large datasets. Ensuring the algorithms are sensitive, specific and timely is crucial for protecting public health. Here, we evaluate the performance of three detection algorithms extensively used for syndromic surveillance: the ‘rising activity, multilevel mixed effects, indicator emphasis’ (RAMMIE) method and the improved quasi-Poisson regression-based method known as ‘Farrington Flexible’ both currently used at Public Health England, and the ‘Early Aberration Reporting System’ (EARS) method used at the US Centre for Disease Control and Prevention. We model the wide range of data structures encountered within the daily syndromic surveillance systems used by PHE. We undertake extensive simulations to identify which algorithms work best across different types of syndromes and different outbreak sizes. We evaluate RAMMIE for the first time since its introduction. Performance metrics were computed and compared in the presence of a range of simulated outbreak types that were added to baseline data.
机译:动机如果公共卫生当局拥有有效的多功能监视系统,他们可以在卫生事件发生时提供更有效,更及时的干预措施,以保护人们。这些系统依靠像差检测算法来识别大型数据集中的潜在威胁。确保算法敏感,特定和及时对保护公共健康至关重要。在这里,我们评估了三种广泛用于综合征监测的检测算法的性能:“上升活动,多级混合效应,指标强调”(RAMMIE)方法和改进的基于准泊松回归的方法,即“ Farrington Flexible”英国公共卫生部门使用了“早期畸变报告系统”(EARS)方法,美国疾病控制与预防中心使用了“早期畸变报告系统”(EARS)方法。我们对PHE使用的日常症状监测系统中遇到的各种数据结构进行建模。我们进行广泛的模拟,以找出哪种算法在不同类型的症状和不同爆发规模上效果最佳。自推出以来,我们首次评估RAMMIE。在存在一系列添加到基准数据中的模拟爆发类型的情况下,对性能指标进行了计算和比较。

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