首页> 外文学位 >Molecular characterization of outer membrane protein E of Moraxella (Branhamella) catarrhalis.
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Molecular characterization of outer membrane protein E of Moraxella (Branhamella) catarrhalis.

机译:卡他莫拉菌(Branhamella)的外膜蛋白E的分子表征。

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摘要

Outer membrane protein E is a 50 kDa major protein of Moraxella (Branhamella) catarrhalis. The gene encoding OMP E was cloned and the nucleotide sequence was determined. An open reading frame of 1,377 bp encoding a protein of 460 amino acids residues was identified The molecular mass of OMP E deduced from the amino acid sequence was 47.03 kDa which correlates well with sodium dodecyl sulfate-polyacrylamide gel electrophoresis. OMP E is synthesized as a precursor possessing a signal peptide of 25 amino acids cleaved by signal peptidase 1 during export to the outer membrane. The transcription initiation site was identified to be 78 nucleotides upstream of the ATG start codon. The predicted amino acids sequence was subjected to hydrophobicity analysis. This analysis indicates that OMP E, like other known porins, does not have long stretches of hydrophobic amino acids The hydropathy index of OMP E was calculated to be {dollar}-{dollar}0.69 indicating an overall hydrophilic composition. A homology search revealed borderline homology to FadL of E. coli (25.5% identity) and some porin proteins (20-25% identity). Restriction fragment length polymorphism analysis of the OMP E gene of 19 different strains of M. catarrhalis from diverse geographical and clinical sources, showed that the OMP E gene was highly conserved. Polyclonal and four monoclonal antibodies (MAbs) were generated to OMP E to study its antigenic structure. These antibodies recognized epitopes present in all strains tested. All MAbs were specific for M. catarrhalis, in that they did not react with any of eight gram-negative bacteria tested. Two MAbs, 1B3 and 9G10, recognized epitopes that are present on the surface of the intact bacterium. MAbs 1C11 and 7C10 recognized epitopes that are buried within the membrane. Proteinase K digestion of the whole bacterial cells showed that MAbs 1B3 and 9G10 recognized surface exposed epitopes located in the 17-kDa region of the amino terminus of OMP E molecule. OMP E was purified to homogeneity. The native structural size of OMP E was determined to be a trimer. These studies have demonstrated that OMP E has surface-exposed epitopes which are highly conserved among M. catarrhalis strains. Therefore OMP E is an excellent candidate as a vaccine antigen.
机译:外膜蛋白E是50kDa的卡他莫拉菌(Branhamella)的主要蛋白。克隆了编码OMP E的基因,并确定了核苷酸序列。鉴定出一个开放阅读框,其编码了460个氨基酸残基的蛋白质的1,377 bp。从该氨基酸序列推导的OMP E的分子量为47.03 kDa,与十二烷基硫酸钠-聚丙烯酰胺凝胶电泳有很好的相关性。 OMP E被合成为具有在输出到外膜期间被信号肽酶1切割的25个氨基酸的信号肽的前体。转录起始位点被鉴定为ATG起始密码子上游的78个核苷酸。对预测的氨基酸序列进行疏水性分析。该分析表明,OMP E像其他已知的孔蛋白一样,不具有长的疏水性氨基酸。OMP E的亲水指数经计算为{美元}-{美元} 0.69,表明整体亲水性组成。同源性搜索显示与大肠杆菌的FadL(25.5%的同一性)和一些孔蛋白(20-25%的同一性)具有临界同源性。对来自不同地理和临床来源的19种不同卡他莫拉氏菌OMP E基因的限制性片段长度多态性分析表明,OMP E基因是高度保守的。产生了针对OMP E的多克隆抗体和四种单克隆抗体(MAb),以研究其抗原结构。这些抗体识别存在于所有测试菌株中的表位。所有单克隆抗体对卡他氏菌均具有特异性,因为它们与八种革兰氏阴性菌中的任何一种都不发生反应。两个单克隆抗体1B3和9G10识别完整细菌表面上存在的表位。单克隆抗体1C11和7C10识别掩埋在膜内的表位。整个细菌细胞的蛋白酶K消化显示,单克隆抗体1B3和9G10识别位于OMP E分子氨基末端17-kDa区的表面暴露表位。 OMP E纯化至均质。 OMP E的天然结构尺寸被确定为三聚体。这些研究表明,OMP E具有表面暴露的抗原决定簇,在卡他莫拉氏菌菌株中高度保守。因此,OMP E是疫苗抗原的极佳候选者。

著录项

  • 作者

    Bhushan, Reva.;

  • 作者单位

    State University of New York at Buffalo.;

  • 授予单位 State University of New York at Buffalo.;
  • 学科 Biology Microbiology.
  • 学位 Ph.D.
  • 年度 1995
  • 页码 153 p.
  • 总页数 153
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 微生物学;
  • 关键词

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