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Towards an atomic-resolution structure of filamentous actin.

机译:走向丝状肌动蛋白的原子分辨结构。

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摘要

Despite a wealth of biochemical and structural information, the structure of filamentous actin (F-actin) remains to be elucidated. The tendency of monomeric actin to polymerize into filaments of random length precludes crystallization; therefore, models of the filamentous form of actin have been constructed using data obtained by electron microscopy and fiber diffraction of two-dimensional paracrystals as constraints. These models, however, have not definitively fit all the biochemical cross-linking data, and remain open to speculation. Until an atomic-resolution crystal structure of F-actin is determined, the mechanism of motile activity will not be solved.; The first step in achieving a crystal structure of F-actin is the purification of discrete oligomers of actin. This work describes two such approaches utilizing the actin-binding proteins gelsolin and tropomyosin, and a cyclic peptide, phalloidin. In the first, tropomyosin is added to gelsolin:actin filaments at a ratio of 14 actin:2 tropomyosin:1 gelsolin, purified, and crystallized. Structural and biochemical experiments revealed that instead of forming a complex with the desired ratio, tropomyosin caused an annealing into longer filaments. In addition, gelsolin was found to (at least) partially dissociate from the actin filaments, but remains decorated to tropomyosin-stabilized filaments, suggesting hitherto unknown regulatory functions for both tropomyosin and gelsolin.; The second method employs gelsolin and phalloidin. Upon addition of phalloidin to short gelsolin:actin filaments, two chromatographic species are formed. The larger of these is a heterogeneous population of complexes with an average of fourteen actin per gelsolin, containing phalloidin. The second species is a homogeneous complex comprised of three actin per gelsolin, but devoid of phalloidin. This complex can be concentrated and re-chromatographed, and is the first known discrete oligomer of defined length to be purified. This species is a promising candidate for crystallization, and can reveal intrafilament contacts, as well as the structural interactions between gelsolin and actin.
机译:尽管有大量的生化和结构信息,丝状肌动蛋白(F-肌动蛋白)的结构仍有待阐明。单体肌动蛋白聚合成任意长度的长丝的趋势会阻止结晶;因此,肌动蛋白丝状形式的模型已经建立在电子显微镜和二维副晶体的纤维衍射数据的约束下。然而,这些模型尚未明确地拟合所有生化交联数据,并仍有待推测。在确定F-肌动蛋白的原子分辨率晶体结构之前,其运动活性的机理将无法解决。实现F-肌动蛋白晶体结构的第一步是纯化肌动蛋白的离散低聚物。这项工作描述了两种利用肌动蛋白结合蛋白凝溶胶蛋白和原肌球蛋白以及环肽鬼笔环肽的方法。首先,将原肌球蛋白以14肌动蛋白:2原肌球蛋白:1凝溶胶蛋白的比例添加到凝溶胶蛋白:肌动蛋白丝中,进行纯化和结晶。结构和生化实验表明,原肌球蛋白不是形成所需比例的复合物,而是退火成更长的长丝。此外,发现凝溶胶蛋白(至少)与肌动蛋白丝部分解离,但仍修饰为原肌球蛋白稳定的丝,这提示原肌球蛋白和凝溶胶蛋白的调节功能迄今未知。第二种方法使用凝溶胶蛋白和鬼笔环肽。在将鬼笔环肽添加到短的凝溶胶蛋白:肌动蛋白丝上时,形成两种色谱物质。其中较大的是复合物的异质群体,每个凝溶胶蛋白平均含有十四种肌动蛋白,其中含有鬼笔环肽。第二种是均质复合物,每个凝溶胶蛋白包含三个肌动蛋白,但不含鬼笔环肽。该复合物可以浓缩并重新色谱分离,并且是第一个已知的定义长度的待纯化的离散低聚物。该物种是有希望的结晶候选物,并且可以揭示丝内接触以及凝溶胶蛋白和肌动蛋白之间的结构相互作用。

著录项

  • 作者

    Narayan, Kartik.;

  • 作者单位

    Princeton University.;

  • 授予单位 Princeton University.;
  • 学科 Chemistry Biochemistry.; Biology Cell.
  • 学位 Ph.D.
  • 年度 2003
  • 页码 100 p.
  • 总页数 100
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物化学;细胞生物学;
  • 关键词

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