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Zebrafish bloodthirsty: Developmental expression and identification of the mammalian ortholog.

机译:斑马鱼嗜血:哺乳动物直系同源物的发育表达和鉴定。

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摘要

Blood disorders, such as anemias, are serious diseases in humans. Because the hematopoietic program is highly conserved among vertebrates, we are using fish models to isolate novel erythropoietic genes and to elucidate the functions of the encoded proteins. In this thesis, I describe experiments to examine the developmental expression patterns of the novel zebrafish gene, bloodthirsty (bty), and to identify its probable mammalian ortholog.;The novel gene bloodthirsty (bty) was discovered in a subtractive screen that isolated hematopoietic genes that were differentially expressed by the pronephric kidneys of the red-blood Antarctic rockcod, Notothenia coriiceps, and its white-blood relative, the icefish Chaenocephalus aceratus. Zebrafish bty encodes a 532 residue protein (Bloodthirsty, Bty) that belongs to the TRIM (TRIpartite Motif) protein family. Bty contains an N-terminal RING finger, two B-boxes, a coiled-coil region and a C-terminal B30.2 domain. Suppression of translation of the bty mRNA by morpholino oligonucleotide (MO) treatment suggests that Bty is involved in regulation of the terminal steps of the erythropoietic program.;Although bty plays a role in erythropoiesis, it is widely expressed during zebrafish embryogenesis. bty mRNA is expressed in multiple tissues including gut, brain, spinal cord, etc. In contrast, it is not expressed in somites, white matter or matured erythrocytes.;Bioinformatic analysis suggested two candidates for the mammalian ortholog of zebrafish Bty: TRIM27/ret finger protein (33% identity) and TRIM39 (32% identity). To identify the probable ortholog, TRIM27 and TRIM39 mRNAs were tested for their ability to rescue erythropoiesis in zebrafish bty morphant embryos. My results demonstrate that TRIM27 mRNA is able to restore erythropoiesis, whereas TRIM39 mRNA does not, thereby providing strong evidence that the former corresponds to zebrafish bty.;My research advances our understanding of vertebrate erythropoiesis, and therefore may provide new avenues for therapeutic intervention in human diseases of the red blood cell.
机译:血液疾病,例如贫血,是人类的严重疾病。由于造血程序在脊椎动物中高度保守,因此我们使用鱼模型来分离新的造血基因并阐明编码蛋白的功能。在这篇论文中,我描述了实验,以检验斑马鱼新型基因嗜血(bty)的发育表达模式,并鉴定其可能的哺乳动物直系同源物;在隔离造血基因的减性筛选中发现了新型基因嗜血(bty)。红血南极岩鳕的前肾,Notothenia coriiceps及其白血亲属冰鱼Chaenocephalus aceratus的差异表达。斑马鱼bty编码532个残基蛋白(Bloodthirsty,Bty),该蛋白属于TRIM(TRIpartite Motif)蛋白家族。 Bty包含一个N端RING指,两个B盒,一个卷曲螺旋区域和一个C端B30.2结构域。通过吗啉代寡核苷酸(MO)处理抑制bty mRNA的翻译表明,Bty参与了促红细胞生成程序的最终步骤的调节。;尽管bty在促红细胞生成中起作用,但它在斑马鱼的胚胎发生过程中广泛表达。 bty mRNA在多种组织中表达,包括肠道,脑,脊髓等。相比之下,它在节体,白质或成熟的红细胞中不表达。;生物信息学分析表明,哺乳动物斑马鱼直系同源物的两个候选基因Bty:TRIM27 / ret手指蛋白(同一性为33%)和TRIM39(同一性为32%)。为了鉴定可能的直系同源物,测试了TRIM27和TRIM39 mRNA在斑马鱼bty morphant胚胎中挽救红细胞生成的能力。我的研究结果表明TRIM27 mRNA能够恢复红细胞生成,而TRIM39 mRNA不能恢复,从而提供有力的证据表明前者与斑马鱼bty相对应。人类疾病的红细胞。

著录项

  • 作者

    Hu, Mo.;

  • 作者单位

    Northeastern University.;

  • 授予单位 Northeastern University.;
  • 学科 Biology Molecular.;Biology Genetics.
  • 学位 M.S.
  • 年度 2011
  • 页码 76 p.
  • 总页数 76
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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