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Unique Regulatory Properties of Heterotetrameric Inositol 1,4,5-trisphosphate Receptors Revealed by Studying Concatenated Receptor Constructs.

机译:通过研究级联受体构建体揭示了异四聚肌醇1,4,5-三磷酸受体的独特调控特性。

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摘要

Inositol 1,4,5-trisphosphate receptors (IP3R) are a family of ubiquitous, endoplasmic reticulum localized, tetrameric Ca2+ release channels. There are three main subtypes of the IP3Rs (namely R1, R2 and R3), each encoded by a distinct gene (ITPR1, ITPR2 and ITPR3, respectively), that share ∼ 60-70% primary sequence identity. The diversity of Ca 2+ signals generated by IP3Rs is thought to be largely the result of differential tissue expression, intracellular localization and subtype-specific regulation of the three subtypes by various cellular factors. These factors include IP3 (the agonist), Ca2+ (co-agonist), ATP and other adenine nucleotides, phosphorylation by various kinases and interactions with various binding proteins. The regulation of the individual subtypes by these different modulators has been extensively studied.;Another largely unexplored, level of IP3R mediated Ca 2+ signaling diversity is thought to be mediated by the assembly of both homo and heterotetrameric IP3R channels. Although the three subtypes are ubiquitously and differentially expressed in all tissues and do associate in complexes, the biochemical evidence for hetero-oligomerization fail to exclude the possibility that the observed interactions are the result of larger inter-molecular complexes of homotetrameric channels. To address this, a combination of gel filtration chromatography and co-immunoprecipitation assays was used to provide strong biochemical evidence for native heterotetramer formation. Additionally, we provide biochemical evidence for homotetramer formation through the sequential immunodepletion of IP3R isoforms from mouse pancreatic lysates.;Typically, when multiple subtypes of IP3Rs are co-expressed, as is the case cultured cells or isolated tissues, the subunit composition of individual channels cannot be specifically defined. Therefore, understanding the contribution of heterotetrameric IP3R channels with differing subunit composition to shaping the spatio-temporal properties of IP3 -mediated Ca2+ signals has proven to be troublesome. To address this, our approach was to engineer concatenated IP3Rs constructs of defined subunit composition, whereby the CT of one IP3 R monomer is connected to the NT of a subsequent monomer by a short flexible amino acid linker. In this thesis, we establish our ability to successfully engineer and stably express concatenated homo and heteromeric IP3Rs of defined subunit composition in a null background cell line (DT40-3KO cells). These concatenated proteins oligomerize into tetrameric channels, localize to internal membranes and are functionally indistinguishable from IP 3Rs assembled from monomeric constructs. Accordingly, we use this approach to the contribution of individual subtypes within defined concatenated heterotetramers to the shaping of Ca2+ signals.;Under conditions where key regulators of IP3R function are optimal for Ca2+ release (200 nM Ca2+ and 5 mM ATP), we demonstrate that individual monomers within heteromeric IP 3Rs contributed equally towards generating a distinct, 'blended' sensitivity to IP3. Homologous competitive IP3 binding assays indicate that this intermediate IP3 sensitivity is likely dictated by the unique, 'blended' apparent IP3 binding affinity of heteromers, which is determined by the constituent subtypes. However, under sub-optimal conditions where [ATP] were varied, we found that one subtype dictated the ATP regulatory properties of heteromers. Specifically focusing on R2 containing concatemers, we show that two R2 monomers within a heterotetramer were both necessary and sufficient for R2 to dictate the ATP regulatory properties. This stoichiometry of R2 dominance was also observed with the patterns of Ca2+ signals generated when intact cells were stimulated with receptor tyrosine kinase / PLC-gamma coupled cell surface agonists.;Lastly, we sought to address questions of regulatory stoichiometry of IP3Rs using a mutagenic approach. Specifically, the critical ATPB site in R2 was mutagenically rendered non-functional. We found that two functional R2 monomers were sufficient to maintain ATP regulation in R2 homotetramers, although it is unclear whether one ATPB site is enough. Interestingly, R2 DeltaR1 and R3R2Delta heterotetramers, rather than switching to an R1 or R3 mode of regulation, lose the ability to be ATP regulated, suggesting that R2 still dictates the ATP regulation in the heterotetramer.;In summary, this thesis demonstrates that the concatenated approach to studying the properties of heterotetrameric IP3Rs is useful in answering fundamental questions regarding IP3R function.
机译:肌醇1,4,5-三磷酸受体(IP3R)是一类普遍存在的内质网局部四聚Ca2 +释放通道。 IP3R有三种主要的亚型(即R1,R2和R3),每个亚型均由不同的基因(分别为ITPR1,ITPR2和ITPR3)编码,共有约60-70%的一级序列同一性。 IP3Rs产生的Ca 2+信号的多样性被认为主要是由于各种细胞因素对三种亚型的组织表达差异,细胞内定位和亚型特异性调节的结果。这些因素包括IP3(激动剂),Ca2 +(共同激动剂),ATP和其他腺嘌呤核苷酸,各种激酶的磷酸化作用以及与各种结合蛋白的相互作用。已经对这些不同的调节剂对单个亚型的调节进行了广泛的研究。另一个很大程度上尚未探索的IP3R介导的Ca 2+信号传导多样性水平被认为是由同源和异源四聚体IP3R通道的组装介导的。尽管这三种亚型在所有组织中普遍存在且差异表达,并且确实以复合物形式缔合,但杂聚化的生化证据未能排除观察到的相互作用是同四聚体通道的较大分子间复合物的结果的可能性。为了解决这个问题,凝胶过滤色谱法和免疫共沉淀法的结合被用来为天然异源四聚体的形成提供强有力的生化证据。此外,我们提供了通过小鼠胰腺裂解物中IP3R同种型的顺序免疫耗竭形成同四聚体的生化证据;通常,当IP3Rs的多种亚型共同表达时(如在培养的细胞或分离的组织中一样),单个通道的亚基组成无法具体定义。因此,了解具有不同亚基组成的异四聚体IP3R通道对塑造IP3介导的Ca2 +信号的时空特性的贡献已被证明是麻烦的。为了解决这个问题,我们的方法是设计具有定义的亚基组成的串联IP3Rs构造,其中一个IP3 R单体的CT通过短的柔性氨基酸接头连接到后续单体的NT上。在本论文中,我们建立了在无效背景细胞系(DT40-3KO细胞)中成功工程化和稳定表达已定义亚基组成的串联同源和异源IP3R的能力。这些连接的蛋白质低聚成四聚体通道,位于内部膜上,与单体构建物组装的IP 3R在功能上没有区别。因此,我们使用这种方法来确定已定义的级联异四聚体中单个亚型对Ca2 +信号形成的贡献。在IP3R功能的关键调节剂最适合Ca2 +释放的条件下(200 nM Ca2 +和5 mM ATP),我们证明了异构IP 3R中的各个单体均对产生对IP3独特的“混合”敏感性做出了同等贡献。同源竞争性IP3结合测定表明,这种中间IP3敏感性可能是由异质子的独特的,“混合的”表观IP3结合亲和力决定的,后者由组成亚型决定。然而,在[ATP]变化的次优条件下,我们发现一种亚型决定了异聚体的ATP调节特性。我们特别关注包含R2的连接物,我们发现异四聚体中的两个R2单体对于R2决定ATP调节特性既是必要的又是足够的。当受体酪氨酸激酶/PLC-γ偶联的细胞表面激动剂刺激完整细胞时,也观察到了Ca2 +信号的模式,从而观察到R2占主导地位。最后,我们试图通过诱变方法解决IP3Rs的化学计量问题。 。具体而言,R2中的关键ATPB位点已通过诱变变为无功能。我们发现两种功能性R2单体足以维持R2同型四聚体中的ATP调节,尽管尚不清楚一个ATPB位是否足够。有趣的是,R2 DeltaR1和R3R2Delta异四聚体没有切换到R1或R3调控模式,而是失去了对ATP调控的能力,这表明R2仍然决定着异四聚体中的ATP调控。研究异四聚体IP3R特性的方法对于回答有关IP3R功能的基本问题很有用。

著录项

  • 作者

    Chandrasekhar, Rahul.;

  • 作者单位

    University of Rochester.;

  • 授予单位 University of Rochester.;
  • 学科 Pharmacology.;Physiology.;Biochemistry.;Biophysics.
  • 学位 Ph.D.
  • 年度 2016
  • 页码 235 p.
  • 总页数 235
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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