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Understanding the mechanism of salt activation of enzymes in nonaqueous media.

机译:了解非水介质中酶的盐活化机制。

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摘要

The goal of this research is to gain a more complete understanding of excipient-induced enzyme activation for nonaqueous biocatalysis. Within the past decade, several techniques have been developed that accelerate enzymatic reactions in a wide range of organic solvents. One of the more intriguing approaches is to lyophilize enzymes from an aqueous solution containing salts and other additives, which are often called excipients. An example of dramatic activation is the nonbuffer salt activation of subtilisin (a typical serine protease) for transesterification reactions in different solvents. In the case of cesium acetate as the excipient, activations of >35,000-fold over that of the non-salt activated preparations are obtained. Despite this tremendous activation, the mechanism of salt activation remains largely unknown. The motivation for this thesis research is based on the likelihood that formulating a better understanding of the mechanism of enzyme activation in nonaqueous media will lead to a set of design principles to activate a wide range of enzymes for use in nonaqueous media.;Hypothesis. Strongly activated enzyme formulations in nonaqueous media will yield a transition state that is closer to that obtained in aqueous buffer than for less active formulations.;This work investigates the structure of activated enzyme preparations in nonaqueous media and compares it to unactivated enzyme formulations. Correlations are made between the retention of native-like secondary structure and increased activity with a range of salt types. In addition, evidence is presented which suggests that the mechanism of salt activation is distinct from lyoprotection.;Kinetic studies are reported which provide information on the transition state characteristics of both salt-free and salt-activated enzyme formulations. Data is presented which shows the direct effects of salt type, solvent medium and water content on the enzymatic transition state, allowing for predictive measures of salt activation.;Finally, preliminary studies are introduced that examine the transition state characteristics and high activation of solubilized enzyme systems. Various parameters, such as substrates, water content and solvent medium, are examined to correlate changes in activity and specificity induced by direct solubilization methods.
机译:这项研究的目的是为了更全面地了解赋形剂诱导的非水生物催化酶的活化。在过去的十年中,已开发出多种技术来加速在多种有机溶剂中的酶促反应。一种更吸引人的方法是从含有盐和其他添加剂的水溶液中冻干酶,这些盐和其他添加剂通常被称为赋形剂。剧烈活化的一个例子是枯草杆菌蛋白酶(一种典型的丝氨酸蛋白酶)的非缓冲盐活化,用于在不同溶剂中进行酯交换反应。在乙酸铯作为赋形剂的情况下,获得的活化度是非盐活化制剂的活化度的35,000倍。尽管有这种巨大的活化作用,但盐活化的机制仍是未知的。进行本论文研究的动机是基于这样一种可能性,即对非水介质中的酶激活机制形成更好的理解将导致一系列设计原则,以激活广泛用于非水介质中的酶。在非水介质中被强活化的酶制剂产生的过渡态比在活性较低的制剂中更接近于在水性缓冲液中获得的过渡态。这项工作研究了在非水介质中被活化的酶制剂的结构并将其与未活化的酶制剂进行比较。在保留类似天然的二级结构和增加一系列盐类型的活性之间建立了相关性。另外,提供的证据表明盐活化的机制不同于冻干保护。;运动学研究报告,其提供了有关无盐和盐活化酶制剂的过渡态特征的信息。给出的数据显示了盐类型,溶剂介质和水含量对酶促过渡态的直接影响,从而可以预测盐活化的方法。最后,引入了初步研究来研究过渡态特征和溶解酶的高活化系统。检查各种参数,例如底物,水含量和溶剂介质,以关联直接增溶方法诱导的活性和特异性变化。

著录项

  • 作者

    Serdakowski, Anne Louise.;

  • 作者单位

    Rensselaer Polytechnic Institute.;

  • 授予单位 Rensselaer Polytechnic Institute.;
  • 学科 Chemistry Biochemistry.
  • 学位 Ph.D.
  • 年度 2007
  • 页码 139 p.
  • 总页数 139
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物化学;
  • 关键词

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